G809980 (emp3)


Basic Information

Item Value
gene id G809980
gene name emp3
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 46204608 ~ 46205463 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU921573
TCGTTGGTCTTTCACAGCACGTGtgaatgtttgtaaacattatcTAGCACTGGTGGTTAGGACCATGCGCTTTTTCTGACCACATTACCTTTTTCAAATCAACTACAACAGTCCTAGTGGCAGATAGAGATGGTTCATTCTTTCACTTCATTACCTGCAAAGACTTGACATAACCCGGTGAAGTAGAATAGCCCCCCTTTGGACATTGTGAAGAGCTGCCCAAGGAAAACCAGAAAGGAAACCGAAGAGAAGACCACAGACAGCACCATCAACACCTGGACTGATTGGAGCCACTCAGTCTCCTTGGAGGAGGCACACAACCAGGTTCCAGTGTCATTGTCAAATCTACAGTTATACCAGAGATCTGAGTTCTCCATCCCATCCCATACCCACCAGGACTTCTCCATGGTGGCAATGAAGAGCATGGCCAAGGTGATTAGATGCAGCAGGGTCACAAACATCAGCAAGTACGCCATCTGAGCAGGGTCCCTGTCAGAAAATGGAGATTGAAATGTGGCTGAAATCACAGATGGTTTACACGTAATAGGCAACATTTATTGTTTCAGTTTTGGCTTGGTTGGTGTTTTTATTGGTTTGAGGGCAGCCAAAACAATATTTTCATTATGGCA

Function

symbol description
emp3 Involved in bleb assembly and cell death. Located in plasma membrane.

NR:

description
Epithelial membrane protein 3 precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU921573 True 629 lncRNA 0.45 3 46204608 46205463

Neighbor

gene id symbol gene type direction distance location
LOC110532211 LOC106572158 coding upstream 19005 46158949 ~ 46185603 (+)
ela2l LOC106572163 coding upstream 429600 45771365 ~ 45775008 (+)
LOC110532198 dram2 coding upstream 658115 45541443 ~ 45546493 (+)
LOC110532197 cept1 coding upstream 663341 45518042 ~ 45541267 (+)
LOC110532192 LOC106572174 coding upstream 710521 45485672 ~ 45494087 (+)
ccdc30 ccdc30 coding downstream 1933 46207396 ~ 46249943 (+)
LOC110532217 LOC106572155 coding downstream 57744 46263207 ~ 46277905 (+)
LOC118966055 NA coding downstream 95801 46301264 ~ 46304747 (+)
LOC118966056 NA coding downstream 103549 46309012 ~ 46310775 (+)
LOC110532219 LOC106572152 coding downstream 112693 46318156 ~ 46354342 (+)
G809979 NA non-coding upstream 1196 46202728 ~ 46203412 (+)
G809691 NA non-coding upstream 59929 46144463 ~ 46144679 (+)
G809687 NA non-coding upstream 63408 46141000 ~ 46141200 (+)
G809666 NA non-coding upstream 98016 46106392 ~ 46106592 (+)
G809617 NA non-coding upstream 163353 46040645 ~ 46041255 (+)
G810023 NA non-coding downstream 44849 46250312 ~ 46252923 (+)
G810027 NA non-coding downstream 48077 46253540 ~ 46254132 (+)
G810022 NA non-coding downstream 49129 46254592 ~ 46256113 (+)
G810024 NA non-coding downstream 50867 46256330 ~ 46257513 (+)
G810030 NA non-coding downstream 52265 46257728 ~ 46258082 (+)
G809685 NA other upstream 68876 46134731 ~ 46135732 (+)
G807841 NA other upstream 1751531 44442662 ~ 44453077 (+)
G807677 NA other upstream 2008567 44195715 ~ 44196041 (+)
G805600 NA other upstream 3855822 42346176 ~ 42348786 (+)
G805451 NA other upstream 3872170 42332093 ~ 42332438 (+)
G812143 NA other downstream 1776538 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 2339991 48545454 ~ 48570593 (+)
G813071 NA other downstream 2754286 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 2797856 48962187 ~ 49006710 (+)
G813139 NA other downstream 2909674 49115137 ~ 49115618 (+)

Expression


Co-expression Network