G810638


Basic Information

Item Value
gene id G810638
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 46365376 ~ 46371475 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU922306
CCATTTGAACAAAAATAGTTTAATGGTAGATGTACCCGCTATGGTCACTGACATATAAGTTACAATAGCTGACAGCGATACAATTGTTTCTTCCAATTCAAATAACAAATAAGTATTTTACCATAACATTAAATACAATTAAAGACTTTATAGTACATAATACGCAAGACTTTGTACACACCTGAACTGTGTTGTGCGATACATTTTAGGCCACAAAATTTTGGAAGGTGCCCCAAGAGTTTCTCCCTCATGCCGCCAATCATGAATATACTCTGACAAGACACAGATATATTAGTAATCTATTTAAACTTCCCTATTCCTTATACTTCATTATTTACTCTTTCTGTAAACTCTTCCTGGTCCGATTCGTTAATTATTTTCCTGTCAACTCTATTTCCCTCTGTGCCTGTCGAGCTTCTTCACAGTTTGTACTTTCTGTAACTCCAGTGACTTACTGTGCTCTTGACCTATTGCGCCTACTTTCCAAGCCACTCAATAATCAAATGGGGGGAAATGATATTTTATAATAATAGGAGCAGTTAACATTCTATACTTCACCGTGTCCACAATTCAGTAACATGTACATGTTTGTGCTAATATTTTGTACTGAAGGCCCTCCAGAATTTCATTTAggtatttttctttcttttttttgtcttttggCTTGAACTGGTCTGGCTTGGGGTGAGACAAGGTTTGGACTGTGGTAGGGACAGCTGGTCTTAGATCTGCGCTTACAGCAATCGCTCCTTCAAAAGAGAAAAGACCCTCCAATATCCACTTACGATGCTCACAACATTAATTCTGGACTGACATGACAAAGATATACATCAGTAGCGAAATAGTCATGCTAGCTCAATGTGGACATCAGACATCTGGCATGGTATCTGATGAgtacaaacaatacaaaacattgaTACAAATGTCTCCACCGAATACAATGGTTAAAAATGTATGGTAGAAAGTTGAGACACAAGAAGTTGGTTGACTGGCTTGATGCCATATTCACAACTGCTTGTATCGAATAACATAAAACAATGCTTACAACAATATCACGAAGGCATGGTTTGACGTAGGAACTGAGAAGTAACAGGGCATTGAGTATCAATACAAGCAACTGACCTGTGTAACAATAACCTTAAGGCAACACATCAGAATACAACACGGAAGAAATCCACTAATGTGCTTCAAATAGTGCTCTGTCGATTCAACTTGAAAATGTTTCAAAGTGAATTTGAGTATGGGAAATTACTATGTGTTCCAAACATCGAATTTTAAACTGGTTGTAGCAATACAGTGCACAAATAAATCATGTTAACATTACATAAAGGACATTACACTCCAACAAAATCAAGGGACAGAATGTGCTGTATGAGTTACCTGAATCAATTGATGTGTTTCTCATAGATGGATGGCCATTGTTCAATCACATTAAGTGAGCACTAGATAGTTCATTCAAATACACTGAGTTAAATACATACCTTCAGTTAAAGTGGGGTTAATAAATAATATAAATCAACAGTTAAATACATACACTACtacaaaagttttagaacacatactcattcaaggGTAATTCCTAAAGGAGAGGAAACAGAATAGGACGCATTATATAGTACAACAACATTGTATAAAAAAGTATAATATTAGATTATTAAATCAGATTAGTAGCATAACATCAACCTTCTACAGTCTGCAAAACTGGAATTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU922306 True 1712 lncRNA 0.36 2 46365376 46371475

Neighbor

gene id symbol gene type direction distance location
alas2 alas2 coding downstream 47851 46305459 ~ 46317525 (-)
LOC110532215 LOC106572154 coding downstream 101542 46256999 ~ 46263834 (-)
LOC110532213 emp3 coding downstream 158672 46202726 ~ 46206704 (-)
zmynd12 zmynd12 coding downstream 165126 46187156 ~ 46200250 (-)
LOC110532208 LOC106572161 coding downstream 324111 45816274 ~ 46041265 (-)
LOC110532223 LOC100380856 coding upstream 21626 46393101 ~ 46525481 (-)
LOC110531189 pigt coding upstream 273315 46644716 ~ 46656973 (-)
LOC110532229 sycp2 coding upstream 348087 46719562 ~ 46781807 (-)
LOC110533016 sycp2 coding upstream 410333 46781808 ~ 46783939 (-)
prdm2a LOC106572143 coding upstream 430113 46801588 ~ 46819009 (-)
G810623 LOC106572152 non-coding downstream 19081 46344674 ~ 46346295 (-)
G810596 NA non-coding downstream 60963 46304137 ~ 46304413 (-)
G810595 NA non-coding downstream 62415 46302723 ~ 46302961 (-)
G810563 NA non-coding downstream 108454 46253514 ~ 46256922 (-)
G810649 NA non-coding upstream 18143 46389618 ~ 46392134 (-)
G810762 NA non-coding upstream 200317 46571792 ~ 46571991 (-)
G810788 NA non-coding upstream 233463 46604938 ~ 46607793 (-)
G810789 NA non-coding upstream 233657 46605132 ~ 46606666 (-)
G810800 NA non-coding upstream 249766 46621241 ~ 46630667 (-)
pdyn pdyn other downstream 1046610 45316564 ~ 45318766 (-)
G809071 LOC106572179 other downstream 1067526 45295856 ~ 45298740 (-)
G808375 NA other downstream 1728530 44634559 ~ 44636846 (-)
G811300 NA other upstream 807329 47178804 ~ 47181797 (-)
LOC110531190 clcn6 other upstream 1291590 47642136 ~ 47676649 (-)
LOC110532252 fkb1a other upstream 1906699 48278174 ~ 48286453 (-)
G812840 NA other upstream 2137170 48508645 ~ 48509094 (-)
G813357 LOC106578276 other upstream 2543960 48915435 ~ 48915704 (-)

Expression


Co-expression Network