G811173


Basic Information

Item Value
gene id G811173
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 47271125 ~ 47271346 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU922891
GTTCTATACATGAGGAACAGCGGTTCCTTGTTTTTGCCCTCAGTTGTTTGCCAGACAAAGTTCTTGTCAAATACATAACTGGTTTGTTGGGAATTTTAGGACTTTTGGTGGACTACTTATTCAAAATTCCTTTTATCCGTTTTGCTTGATTGATTAAGCTCGTTTTTTCCCCTCTAAACTAGCTTTTTCTGTCACTAGAGGTGATGATGTTTTCCCCCTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU922891 True 222 lncRNA 0.38 1 47271125 47271346

Neighbor

gene id symbol gene type direction distance location
LOC110532236 LOC106572136 coding upstream 51951 47191735 ~ 47219174 (+)
klhl17 LOC106572137 coding upstream 89317 47149946 ~ 47181808 (+)
LOC118966184 NA coding upstream 159819 47108351 ~ 47111306 (+)
LOC110532233 samd11 coding upstream 175724 47002142 ~ 47095401 (+)
LOC110532228 LOC106572145 coding upstream 559084 46657987 ~ 46712041 (+)
LOC110532242 kiaa2013 coding downstream 307996 47579342 ~ 47589218 (+)
LOC110533017 LOC106572130 coding downstream 354986 47626332 ~ 47627942 (+)
LOC110533018 LOC106572129 coding downstream 364024 47635370 ~ 47636413 (+)
LOC110532243 mthfr coding downstream 408194 47679540 ~ 47694148 (+)
LOC110532248 LOC106572122 coding downstream 714993 47986339 ~ 48023190 (+)
G811168 NA non-coding upstream 9775 47261085 ~ 47261350 (+)
G811164 NA non-coding upstream 14064 47256823 ~ 47257061 (+)
G811161 NA non-coding upstream 19085 47251810 ~ 47252040 (+)
G811108 NA non-coding upstream 124712 47145796 ~ 47146413 (+)
G811067 NA non-coding upstream 155175 47114170 ~ 47115950 (+)
G811382 NA non-coding downstream 42803 47314149 ~ 47314379 (+)
G811394 NA non-coding downstream 56077 47327423 ~ 47327676 (+)
G811409 NA non-coding downstream 62369 47333715 ~ 47334026 (+)
G811412 NA non-coding downstream 64134 47335480 ~ 47335792 (+)
G811415 NA non-coding downstream 66397 47337743 ~ 47337942 (+)
G809685 NA other upstream 1135393 46134731 ~ 46135732 (+)
G807841 NA other upstream 2818048 44442662 ~ 44453077 (+)
G807677 NA other upstream 3075084 44195715 ~ 44196041 (+)
G805600 NA other upstream 4922339 42346176 ~ 42348786 (+)
G805451 NA other upstream 4938687 42332093 ~ 42332438 (+)
G812143 NA other downstream 710655 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 1274108 48545454 ~ 48570593 (+)
G813071 NA other downstream 1688403 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 1731973 48962187 ~ 49006710 (+)
G813139 NA other downstream 1843791 49115137 ~ 49115618 (+)

Expression


Co-expression Network