G811409


Basic Information

Item Value
gene id G811409
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 47333715 ~ 47334026 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU923157
tcatcgactcagtgggttttgtccaacatgtctctggacctactcactgtcacagtcatactctggacctagttttgtcccatggaataaatgttgtagatcttaatgtttttcctcataatcctgaactatcggaccaccattttattacgtttgcaattgcaacaaataatctgctcagaccccaaccaaggagcatcaaaagtcgtgctataaattcacagacaacacaaagattccttgatgcccttccagactccctctgtctacccaaggacgtcagaggacaaaaatcagttaaccatctaactg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU923157 True 312 lncRNA 0.42 1 47333715 47334026

Neighbor

gene id symbol gene type direction distance location
LOC110532236 LOC106572136 coding upstream 114541 47191735 ~ 47219174 (+)
klhl17 LOC106572137 coding upstream 151907 47149946 ~ 47181808 (+)
LOC118966184 NA coding upstream 222409 47108351 ~ 47111306 (+)
LOC110532233 samd11 coding upstream 238314 47002142 ~ 47095401 (+)
LOC110532228 LOC106572145 coding upstream 621674 46657987 ~ 46712041 (+)
LOC110532242 kiaa2013 coding downstream 245316 47579342 ~ 47589218 (+)
LOC110533017 LOC106572130 coding downstream 292306 47626332 ~ 47627942 (+)
LOC110533018 LOC106572129 coding downstream 301344 47635370 ~ 47636413 (+)
LOC110532243 mthfr coding downstream 345514 47679540 ~ 47694148 (+)
LOC110532248 LOC106572122 coding downstream 652313 47986339 ~ 48023190 (+)
G811394 NA non-coding upstream 6039 47327423 ~ 47327676 (+)
G811382 NA non-coding upstream 19336 47314149 ~ 47314379 (+)
G811173 NA non-coding upstream 62369 47271125 ~ 47271346 (+)
G811168 NA non-coding upstream 72365 47261085 ~ 47261350 (+)
G811164 NA non-coding upstream 76654 47256823 ~ 47257061 (+)
G811412 NA non-coding downstream 1454 47335480 ~ 47335792 (+)
G811415 NA non-coding downstream 3717 47337743 ~ 47337942 (+)
G811416 NA non-coding downstream 3931 47337957 ~ 47338180 (+)
G811437 NA non-coding downstream 17057 47351083 ~ 47351772 (+)
G811492 NA non-coding downstream 75387 47409413 ~ 47411226 (+)
G809685 NA other upstream 1197983 46134731 ~ 46135732 (+)
G807841 NA other upstream 2880638 44442662 ~ 44453077 (+)
G807677 NA other upstream 3137674 44195715 ~ 44196041 (+)
G805600 NA other upstream 4984929 42346176 ~ 42348786 (+)
G805451 NA other upstream 5001277 42332093 ~ 42332438 (+)
G812143 NA other downstream 647975 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 1211428 48545454 ~ 48570593 (+)
G813071 NA other downstream 1625723 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 1669293 48962187 ~ 49006710 (+)
G813139 NA other downstream 1781111 49115137 ~ 49115618 (+)

Expression


Co-expression Network