G811875


Basic Information

Item Value
gene id G811875
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 47707362 ~ 47766995 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU923681
GGCTTCAACTAATTTTCTTTATTGCACTTACAAGCATCTATAACAAAATATCAAAAAGCATTTTGTTTAAGAAAAAACATTGTTCATCTGAAAACATCCCCTATCCAGCATTGAATGGCTGTGCAGTCAATTGTTATGGCATCTACCTCAATACACAAATTATTCAGCCACGCTAAACAAATGATAACAGTGGCctacaaaaaagtgttaaaaaaactGAGCAAATAACAAAATCGCGTTTTCTAAAAATGTCACATTGTCCCTCACAATATTTCACATTATTCCCTTGTGTAGCCTATACAGTGCCCTTGGAAAGTATTCTGAACCATTGACTTTTTCAATATTTtgtaatgtttttgctttgtcattacggggtattgtgtgtagattgctgagaattttagtatttatttaatacattttagaataaggctgtaatgtaacaaaatgtggaaaaattcaaggggtctgaatactttccgaaggcaccgtatatactctacatgaccaaaaatatgtggacacctgctcgtcgaacatctcgtCCCAAAcacatgggcattaatatggagttggtccccccatgtgctgctataacagcctccactcttctgggaaggctttccactagatgttagaaaatagctgaggggacttgcttccagccttagtgaggttgggcaatgATGTTAGGTGATTAGGCCTAGTTCGCAGtcgccgttccaattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU923681 True 729 lncRNA 0.38 2 47707362 47766995

Neighbor

gene id symbol gene type direction distance location
LOC110532243 mthfr coding upstream 13214 47679540 ~ 47694148 (+)
LOC110533018 LOC106572129 coding upstream 70949 47635370 ~ 47636413 (+)
LOC110533017 LOC106572130 coding upstream 79420 47626332 ~ 47627942 (+)
LOC110532242 kiaa2013 coding upstream 118144 47579342 ~ 47589218 (+)
LOC110532236 LOC106572136 coding upstream 488188 47191735 ~ 47219174 (+)
LOC110532248 LOC106572122 coding downstream 219344 47986339 ~ 48023190 (+)
ntsr1 LOC106572121 coding downstream 337337 48104332 ~ 48158964 (+)
snphb LOC106572120 coding downstream 457652 48224647 ~ 48259337 (+)
LOC110532257 LOC106572113 coding downstream 619772 48386767 ~ 48394099 (+)
LOC110532258 LOC106572114 coding downstream 633642 48400637 ~ 48404003 (+)
G811690 NA non-coding upstream 132001 47572274 ~ 47575361 (+)
G811674 NA non-coding upstream 165530 47541438 ~ 47541832 (+)
G811668 NA non-coding upstream 172463 47534659 ~ 47534899 (+)
G811492 NA non-coding upstream 296136 47409413 ~ 47411226 (+)
G811437 NA non-coding upstream 355590 47351083 ~ 47351772 (+)
G812051 NA non-coding downstream 136389 47903384 ~ 47927961 (+)
G812052 NA non-coding downstream 145938 47912933 ~ 47919012 (+)
G812109 NA non-coding downstream 163120 47930115 ~ 47930416 (+)
G812110 NA non-coding downstream 165181 47932176 ~ 47932706 (+)
G812126 NA non-coding downstream 193001 47959996 ~ 47960219 (+)
G809685 NA other upstream 1571630 46134731 ~ 46135732 (+)
G807841 NA other upstream 3254285 44442662 ~ 44453077 (+)
G807677 NA other upstream 3511321 44195715 ~ 44196041 (+)
G805600 NA other upstream 5358576 42346176 ~ 42348786 (+)
G805451 NA other upstream 5374924 42332093 ~ 42332438 (+)
G812143 NA other downstream 215006 47982001 ~ 47982301 (+)
G812688 LOC106572106 other downstream 778459 48545454 ~ 48570593 (+)
G813071 NA other downstream 1192754 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 1236324 48962187 ~ 49006710 (+)
G813139 NA other downstream 1348142 49115137 ~ 49115618 (+)

Expression


Co-expression Network