G812555


Basic Information

Item Value
gene id G812555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 48329596 ~ 48329827 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU924400
ttatttaaccaggtaagttctcatttacatctatgacctggccaagataaagcaaagcagtgcgacaaaaacaacaacacagagttacacatgggataaacaaacgtacagtcaataacacaatagaaaaaatctgcatacagtgtgtgcaaattaagtaaggaggtaaggcaataaataggccatagcggcgaagtaattacaatttagcaattaacactgtagtgataga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU924400 True 232 lncRNA 0.36 1 48329596 48329827

Neighbor

gene id symbol gene type direction distance location
snphb LOC106572120 coding upstream 70259 48224647 ~ 48259337 (+)
ntsr1 LOC106572121 coding upstream 170632 48104332 ~ 48158964 (+)
LOC110532248 LOC106572122 coding upstream 306406 47986339 ~ 48023190 (+)
LOC110532243 mthfr coding upstream 635448 47679540 ~ 47694148 (+)
LOC110533018 LOC106572129 coding upstream 693183 47635370 ~ 47636413 (+)
LOC110532257 LOC106572113 coding downstream 56940 48386767 ~ 48394099 (+)
LOC110532258 LOC106572114 coding downstream 70810 48400637 ~ 48404003 (+)
taf13 taf13 coding downstream 251416 48581243 ~ 48582509 (+)
LOC110531191 LOC106566483 coding downstream 286496 48616323 ~ 48617448 (+)
LOC118966185 NA coding downstream 289156 48618983 ~ 48620336 (+)
G812382 NA non-coding upstream 43170 48278177 ~ 48286426 (+)
G812101 NA non-coding upstream 297478 48029315 ~ 48032118 (+)
G812103 NA non-coding upstream 301609 48027529 ~ 48027987 (+)
G812102 NA non-coding upstream 303417 48024222 ~ 48026179 (+)
G812127 NA non-coding upstream 368849 47960522 ~ 47960747 (+)
G812613 NA non-coding downstream 96457 48426284 ~ 48435659 (+)
G812683 NA non-coding downstream 204744 48534571 ~ 48534871 (+)
G812684 LOC106572106 non-coding downstream 208200 48538027 ~ 48541698 (+)
G812951 NA non-coding downstream 411975 48741802 ~ 48742338 (+)
G812143 NA other upstream 347295 47982001 ~ 47982301 (+)
G809685 NA other upstream 2193864 46134731 ~ 46135732 (+)
G807841 NA other upstream 3876519 44442662 ~ 44453077 (+)
G807677 NA other upstream 4133555 44195715 ~ 44196041 (+)
G805600 NA other upstream 5980810 42346176 ~ 42348786 (+)
G812688 LOC106572106 other downstream 215627 48545454 ~ 48570593 (+)
G813071 NA other downstream 629922 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 673492 48962187 ~ 49006710 (+)
G813139 NA other downstream 785310 49115137 ~ 49115618 (+)
G815428 NA other downstream 2466387 50796214 ~ 50800381 (+)

Expression


Co-expression Network