G812613


Basic Information

Item Value
gene id G812613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 48426284 ~ 48435659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU924464
CTCTAAAATCAAGCCACATTCACCAACTAAACCCATTTTTTATCCAGAAAAATGCCTGGAAAGTAATGCAAAAGTAACTGAAAGCAATCCGATTATTTGACCGAGTTCGGGTAATCTCAAAATTACATTACTGATCATTTTGGGACAGGTAACTAACTAGCGACTAGAACAGATTACATGTATAATGTAACCTAACCAAACCTGTTTGTAGATACCCTATTTCTTCATAAAACATTTGTGATTTCGTCATTACTTTGCGCATTCGTGTCAGTAAGACCACTGTTGGTCCggaaccctaacctttaaccataaaaccttaaccattttaaaatgTCATGTTCAATGGAGTAGTGACACCAgaaggatcccggatagcaagGACCCCTGTTATAACCCTTCACAAAACAACACGTGGGAGAAACGAGGTGCATCTATCTTCCTCATACACACCTTACCTTTTCTAATTGTAATAATAGTGACATTTTGGACTATCTAGTACGGCTGGAGCGTTAAGTGACTATTTTATAAGTTGGAACTCCAAGCAAAAATTCATAATCGAAAATAAGAACACTAGAAATGACTAGTTAGTAGGTTACTTTGTTGCATTGGCTGTACTATTGAGCGTAATAACTTTACATAAGCCACCGCTAACCAGCACGTGTTGCTAAATTCTCCGAATTCCATGGAGCGTTTTAATGTAACTTTTATCAAATGACAGCCCGTCCATATAATTGAGGGCAAAGAATACTGAAAAATTTACTGACAAAGTAACCTTCCAACTTTATCAAAACATAACTACAGTAATTCGTTTGTATTGAGGTTTCATCAAAGTGTCACTTTATTTTCGTCTGATTTAGGAAGTGTTGATAAAAAGCCAGCTAACAGTACATATAACAACAGAACGAGCTAATGTTTTCATCACGTAGCTAGTCAGACGGTCTACAACGGACATTGTTATCTTACCTACCTACACCAAAAGTGGAATGTCTTCAACGGCAACACTTTACTGAGCTGCTTTAAAAAAATCCTATTGTACCAGTCCTGCTGTCAAAATCCGAGAAGGGAAATGAACTATTTCGATGTGGTATGagtatctatctgtctgtcgTGAATCCCCTGCTCTCGTGTGTGCGCCCAGACTTCTCAATCCAACACGTAACTAAGGCTGCGTTTAAACAGGCAGCCCGATTCTGATCTTTtgttttcactaattggtcttttgaacaATCTAATCtgtgaaaaatatattttgtgaaaatatctgatgtgattggtcaaacaAACAATTGTGTGGTTTAAAGATCATAATTATGTAAACGCAGCCAATCCCCATTTTCCACCAATCAACACTTATGTCGGAGACCTTTAACCACTGCACACACCCACAGGAATATGGCTTGTTGGGTAACATCGGCTATGGTTTTTACAATTTTAACATAAAAGGGGCTCTAGAACTTCTAGGGGGAGTCAGTAGGGCACCGGAACTTATCACCAACACTCCAAGCCTTTCCTTTGCAGGAGATAAACAGGAACTGATGACTTTCAAAGCATCTGCCCCTGAGGGTAACAATCATTGCTTCGATCTCTTGCATTACTACACACTCCCCTACTTCTGATAGGGGAGCTCCCATACACCTCAGAGTCCCACCAGCCTCCCCGTTCCATCTCCAGACCCTCCTAGGGTGCCGGGGGCTGTGGCTGGCCCATCTCAGGAGCAGCGATGTGGAAGACGGAGCCGATGCGGAGGAAGAAACGGCGTAGGACGGCGCGGAGCTCTGGGATCAGGTCAAACTGCATCATCTCACACAGGACACTCACAGCAGCAGTCGTGTCTGGATGTCAGGCCAGGAGTCCTGGAGCTGGCGGTCACAGTACATACGGAACAGAATACGCAGGCTACAGGCCAGGCTACTGGTCTCCTGCTTTAGCAGATTGGGCTTCGACTTCCCCTTAAATCCTGAGACACAGACAGCCATATGAATGTAGATGGACATACCACAGAGATGACAAGAGAATCCTGTATCTCACATGACAGATCTgaacacaccagacacacagacagttgaACGCACCTGCTCTCCAGAGTGCAGTCCTCTGCTCGTTGTTAGAGTTGAAATCTCTGGCGAAGGTGTGTGACTCCAGCAGGCAGTCCAGCAGCTTGAAAAGGTGCTGGGAGGAGAGGTGTCTGTACATGCCTTGCTCCCCCTGCCCAGGGTCCCCTTCCTCTGCAGCCTCCTCCAGAGCATCCCTCTGGGAGAGACATAGCACAGAGTCTAGGTCAATCCtccaacaacatacagtacacccaAAACACCCTACTAAGTTGATGCATAAATGCCCTGATTAAATGTGAATATGGGTCAAGACTTCAGTTTCGAGCCATTGTAGTTTAGCTCCATTATGACAAACCTGTGCAGCAGCCATATTTTCGGCATCTTCCTTCTTGCTGGTTGCCGGGTAGAAGACAATGTTGTCAATGGTCTGGATCAGCTCCAGCTGCACCACACACTTGATGAGCAGTCCAGCAAACAGCTTCTGGTCTGACACTCCTGCCACAGACACAGAGCACAGCGGCATCAGGAAGACAGATAGGAACCCACGAGAGACTGAGGTCAAATGTGGAAAAGTGGAACACGACAAGGAGGATGAGGGCTCTGTCATAGCTGCTCTGGGATTGGGTGTCAAAATCTACATCCTGTAGTATGTTTGAGAGAAAACAACTCATGATACAAACAAACGGCAAGATATTTATTTTCAAAAGTCAAATCACTGCCATATACTAATGTATGTCTATAGTCAGGCTCAAAAGCTTTAATTTGACTGTCTGAAGCTTCATAAATATTGTTTACCCACCATATGTTTCCCAtcaccagcctcctcttcctGACCAGCTGGTCGCCATGTCAACAGGCTGTAGAGAGGAGAAAAAAGAATGTGCACATCATCAGTCATGTGGTTTATTGGAGGAAGGGTTTCCTGTGTCCATGACTTACCATGGCCTGCTGAAAGTTCTGCTCATGACTACATCTGACATCAGACTTGTTCTTGCAATGCAACGCAAATACAAGATCAGCATTTCTTACTATAACAGTGCGTTTTCTGTCTATGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU924464 True 3109 lncRNA 0.44 4 48426284 48435659

Neighbor

gene id symbol gene type direction distance location
LOC110532258 LOC106572114 coding upstream 22281 48400637 ~ 48404003 (+)
LOC110532257 LOC106572113 coding upstream 32185 48386767 ~ 48394099 (+)
snphb LOC106572120 coding upstream 166947 48224647 ~ 48259337 (+)
ntsr1 LOC106572121 coding upstream 267320 48104332 ~ 48158964 (+)
LOC110532248 LOC106572122 coding upstream 403094 47986339 ~ 48023190 (+)
taf13 taf13 coding downstream 145584 48581243 ~ 48582509 (+)
LOC110531191 LOC106566483 coding downstream 180664 48616323 ~ 48617448 (+)
LOC118966185 NA coding downstream 183324 48618983 ~ 48620336 (+)
si:rp71-17i16.5 LOC106572104 coding downstream 190660 48626319 ~ 48636018 (+)
lamb2l LOC106572102 coding downstream 201878 48637537 ~ 48698384 (+)
G812555 NA non-coding upstream 96457 48329596 ~ 48329827 (+)
G812382 NA non-coding upstream 139858 48278177 ~ 48286426 (+)
G812101 NA non-coding upstream 394166 48029315 ~ 48032118 (+)
G812103 NA non-coding upstream 398297 48027529 ~ 48027987 (+)
G812102 NA non-coding upstream 400105 48024222 ~ 48026179 (+)
G812683 NA non-coding downstream 98912 48534571 ~ 48534871 (+)
G812684 LOC106572106 non-coding downstream 102368 48538027 ~ 48541698 (+)
G812951 NA non-coding downstream 306143 48741802 ~ 48742338 (+)
G812966 NA non-coding downstream 360644 48796303 ~ 48796775 (+)
G812143 NA other upstream 443983 47982001 ~ 47982301 (+)
G809685 NA other upstream 2290552 46134731 ~ 46135732 (+)
G807841 NA other upstream 3973207 44442662 ~ 44453077 (+)
G807677 NA other upstream 4230243 44195715 ~ 44196041 (+)
G805600 NA other upstream 6077498 42346176 ~ 42348786 (+)
G812688 LOC106572106 other downstream 109795 48545454 ~ 48570593 (+)
G813071 NA other downstream 524090 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 567660 48962187 ~ 49006710 (+)
G813139 NA other downstream 679478 49115137 ~ 49115618 (+)
G815428 NA other downstream 2360555 50796214 ~ 50800381 (+)

Expression


Co-expression Network