G812688 (LOC106572106)


Basic Information

Item Value
gene id G812688
gene name LOC106572106
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 48545454 ~ 48570593 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU924562
CACCTACAGCGATGATCTCCACGCCGGTGTTCTTCAGCCGGTTGGCTGCAGCGATGGCGTCATCCTGCGACTTCCCATCCGTCAGGAGGATCAGGATACGAGGGGTGTCCGGCCTCGCCCCCGACTCGTGTCTCAGGTTCTCCTCCAGGACATGCAGCAGAGCCTGGCCTGTGAAGGTGTTGCCGCCCTTGTATCTGAAGTTCCTGACGGCCTCCAGCAGTTGCTCTTTGGTAGTGAAGTTGTTGAGCTGCCACTCAGTGCGAGGGTCTCCACTGTACTGAGAAAGGGCTATCTGCACCCTGTCTGGGCCGATATGGAAAGGCGTGACTAGACCCTCCAGGAAGTCCCTGACACGTCTGAAGTTGGTGCGTCCAATGCTCCAGGAGCCGTCCACCAACATGACCACGTCAGCGGCTGCTGTCGTGTCACACTCAAAGGCCTTCCGAGTGGACACCACTGTGACAGGCTGGGTGGGGATTGTCTTCCTGACTTTCTCCCTGTCAGAGTTCTCATCCTCTACTGGTTTCCCCTGAGTTGTCCCCTGCTCCTCCTTATTGTCCACCTTGGAGcgatccttctctttcttcctcttcctcttctctttggGAGCCTTCTCTGTCACCAACTCATTATTCTGGGTAGTTGTTTCTGGAGTAGTTGGAGGTTctgtagtggtggtggtggtggttgccGGCTCATGGTAGACCACAGTGGGTACAGCTACCAGGGCCTCTATGGGGTCATCCAGTTCACCTGACCCTGACCCCCCTGGTAGGGCCTTCCGCCGCTGTTCACGACTGCCACTACGGACCAACTCTTCTTCTCGCAAGCCCTCAATGGTGAAGCGTCTCTTGGCGATGAGTTTCTCCTGTGTGCCGTTGAGCACTAGGACCTGGAGGGCGTATTCCTGGCTGGAGTCCAGACCTGCCACTGTGGCCCGGCCACGCGTGGTCGTCAGCATCAGCTCCGGCTGGGGTACCTCTGAGATGGGCTTCACGCGGACCTTGTATCCCTGGACCGGCCCTTCAGCCTCCTTCCACTTCATCTGCAGCCGATCCTGAGACAGCACTGTCAGCTTCAGACGCCCTTGGCTATGGACTCCAGAGTTCATTAGCACCAGGAGAGTGACCAGGAAAGGCCCCATCAGCGCTGGGCAGCCTGGTCGTTGGCAGTGAAGAGGCATGATGACTAGAACATAGAAACCTGGGGTCGCAAGTTACGTCCAGGTTATTCCTTCAGCGCGAGATGAGACTTTTGCATTCCAAAGGTGAGGATGTCAACAGGCAGAACTTCCGCTTGCACTGCTTTGCTCCCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU924562 True 1316 TUCP 0.57 8 48545454 48570593

Neighbor

gene id symbol gene type direction distance location
LOC110532258 LOC106572114 coding upstream 141451 48400637 ~ 48404003 (+)
LOC110532257 LOC106572113 coding upstream 151355 48386767 ~ 48394099 (+)
snphb LOC106572120 coding upstream 286117 48224647 ~ 48259337 (+)
ntsr1 LOC106572121 coding upstream 386490 48104332 ~ 48158964 (+)
LOC110532248 LOC106572122 coding upstream 522264 47986339 ~ 48023190 (+)
taf13 taf13 coding downstream 10650 48581243 ~ 48582509 (+)
LOC110531191 LOC106566483 coding downstream 45730 48616323 ~ 48617448 (+)
LOC118966185 NA coding downstream 48390 48618983 ~ 48620336 (+)
si:rp71-17i16.5 LOC106572104 coding downstream 55726 48626319 ~ 48636018 (+)
lamb2l LOC106572102 coding downstream 66944 48637537 ~ 48698384 (+)
G812684 LOC106572106 non-coding upstream 3756 48538027 ~ 48541698 (+)
G812683 NA non-coding upstream 10583 48534571 ~ 48534871 (+)
G812613 NA non-coding upstream 109795 48426284 ~ 48435659 (+)
G812555 NA non-coding upstream 215627 48329596 ~ 48329827 (+)
G812382 NA non-coding upstream 259028 48278177 ~ 48286426 (+)
G812951 NA non-coding downstream 171209 48741802 ~ 48742338 (+)
G812966 NA non-coding downstream 225710 48796303 ~ 48796775 (+)
G813047 NA non-coding downstream 339583 48910176 ~ 48910471 (+)
G813052 LOC106575331 non-coding downstream 344683 48915276 ~ 48915608 (+)
G812143 NA other upstream 563153 47982001 ~ 47982301 (+)
G809685 NA other upstream 2409722 46134731 ~ 46135732 (+)
G807841 NA other upstream 4092377 44442662 ~ 44453077 (+)
G807677 NA other upstream 4349413 44195715 ~ 44196041 (+)
G805600 NA other upstream 6196668 42346176 ~ 42348786 (+)
G813071 NA other downstream 389156 48959749 ~ 48959991 (+)
G813074 etbr2 other downstream 432726 48962187 ~ 49006710 (+)
G813139 NA other downstream 544544 49115137 ~ 49115618 (+)
G815428 NA other downstream 2225621 50796214 ~ 50800381 (+)
G815610 NA other downstream 2507854 51078447 ~ 51078942 (+)

Expression


Co-expression Network