G813052 (LOC106575331)


Basic Information

Item Value
gene id G813052
gene name LOC106575331
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 48915276 ~ 48915608 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU924968
CTTACGTTGGTATATCTCAGGCGCCACTGAGACACCAAACGGGAGCTTGAGCCAGCGTTTCCGACCCCAGGGGGTCCAGAAGGTAGTCATGAGGCTGCTTTCTTCATCCAGCTTGCATTGAAGGAATGCATCTCGGGCATCCACCAAGGTGAAAATCCTGGCCTTGGGAAGCTTATAGAGGACATCCTCTAGTGTCGGCATGATGTAGTGGGATCGTTTCAGTGCTTGGTTCAGATGCTTTGGGTCGATGCAGACCCTCAGCTTCTCTGTTTTTTTCACTATGACCATATTGCTGATCCAGTCAGTTGGTTCAGTCACAGATGTCATGTGGCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106575331

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU924968 True 333 lncRNA 0.51 1 48915276 48915608

Neighbor

gene id symbol gene type direction distance location
si:dkey-32e6.3 LOC106572098 coding upstream 125531 48782956 ~ 48789745 (+)
usp19 NA coding upstream 132537 48747659 ~ 48782739 (+)
lamb2 LOC106572101 coding upstream 167752 48699212 ~ 48747524 (+)
lamb2l LOC106572102 coding upstream 216892 48637537 ~ 48698384 (+)
si:rp71-17i16.5 LOC106572104 coding upstream 279258 48626319 ~ 48636018 (+)
LOC110532277 LOC106572094 coding downstream 72834 48988442 ~ 48994535 (+)
LOC110532278 LOC105027762 coding downstream 79027 48994635 ~ 48998285 (+)
LOC110532282 LOC106572092 coding downstream 97555 49013163 ~ 49060073 (+)
LOC110532283 LOC106572090 coding downstream 148080 49063688 ~ 49081175 (+)
LOC110532284 LOC106572089 coding downstream 170216 49085824 ~ 49097702 (+)
G813047 NA non-coding upstream 4805 48910176 ~ 48910471 (+)
G812966 NA non-coding upstream 118501 48796303 ~ 48796775 (+)
G812951 NA non-coding upstream 172938 48741802 ~ 48742338 (+)
LOC118966185 NA non-coding upstream 295218 48618983 ~ 48620336 (+)
G812684 LOC106572106 non-coding upstream 373578 48538027 ~ 48541698 (+)
G813060 NA non-coding downstream 14608 48930216 ~ 48930427 (+)
G812968 NA non-coding downstream 23551 48939159 ~ 48939587 (+)
G812969 NA non-coding downstream 26591 48942199 ~ 48943429 (+)
G813074 etbr2 non-coding downstream 46579 48962187 ~ 49006710 (+)
G813076 NA non-coding downstream 52156 48967764 ~ 48975385 (+)
G812688 LOC106572106 other upstream 344683 48545454 ~ 48570593 (+)
G812143 NA other upstream 932975 47982001 ~ 47982301 (+)
G809685 NA other upstream 2779544 46134731 ~ 46135732 (+)
G807841 NA other upstream 4462199 44442662 ~ 44453077 (+)
G807677 NA other upstream 4719235 44195715 ~ 44196041 (+)
G813071 NA other downstream 44141 48959749 ~ 48959991 (+)
G813139 NA other downstream 199529 49115137 ~ 49115618 (+)
G815428 NA other downstream 1880606 50796214 ~ 50800381 (+)
G815610 NA other downstream 2162839 51078447 ~ 51078942 (+)

Expression


Co-expression Network