G813060


Basic Information

Item Value
gene id G813060
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 48930216 ~ 48930427 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU924976
ACAGAATGCTCGGATGGTTCTTCCCTCAGCATGTTGCACCTGGCCATCTTCTACATTCTCCTCAGGTAGGTCCTCCTCAGCCTCCTCAGGTAGCTTGTCTCCTTGTCTACTGCCAAAGTTACACAGAACCGGCACTGCAATAAtgattgtcagtgtagtgtccatcTTCGTGCAGAGCCCCTCCTTTAGGTAAGGGAATCATTATTTTTTTC

Function

NR:

description
PREDICTED: putative nuclease HARBI1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU924976 True 212 lncRNA 0.48 1 48930216 48930427

Neighbor

gene id symbol gene type direction distance location
si:dkey-32e6.3 LOC106572098 coding upstream 140471 48782956 ~ 48789745 (+)
usp19 NA coding upstream 147477 48747659 ~ 48782739 (+)
lamb2 LOC106572101 coding upstream 182692 48699212 ~ 48747524 (+)
lamb2l LOC106572102 coding upstream 231832 48637537 ~ 48698384 (+)
si:rp71-17i16.5 LOC106572104 coding upstream 294198 48626319 ~ 48636018 (+)
LOC110532277 LOC106572094 coding downstream 58015 48988442 ~ 48994535 (+)
LOC110532278 LOC105027762 coding downstream 64208 48994635 ~ 48998285 (+)
LOC110532282 LOC106572092 coding downstream 82736 49013163 ~ 49060073 (+)
LOC110532283 LOC106572090 coding downstream 133261 49063688 ~ 49081175 (+)
LOC110532284 LOC106572089 coding downstream 155397 49085824 ~ 49097702 (+)
G813052 LOC106575331 non-coding upstream 14608 48915276 ~ 48915608 (+)
G813047 NA non-coding upstream 19745 48910176 ~ 48910471 (+)
G812966 NA non-coding upstream 133441 48796303 ~ 48796775 (+)
G812951 NA non-coding upstream 187878 48741802 ~ 48742338 (+)
LOC118966185 NA non-coding upstream 310158 48618983 ~ 48620336 (+)
G812968 NA non-coding downstream 8732 48939159 ~ 48939587 (+)
G812969 NA non-coding downstream 11772 48942199 ~ 48943429 (+)
G813074 etbr2 non-coding downstream 31760 48962187 ~ 49006710 (+)
G813076 NA non-coding downstream 37337 48967764 ~ 48975385 (+)
G813099 NA non-coding downstream 80907 49011334 ~ 49011612 (+)
G812688 LOC106572106 other upstream 359623 48545454 ~ 48570593 (+)
G812143 NA other upstream 947915 47982001 ~ 47982301 (+)
G809685 NA other upstream 2794484 46134731 ~ 46135732 (+)
G807841 NA other upstream 4477139 44442662 ~ 44453077 (+)
G807677 NA other upstream 4734175 44195715 ~ 44196041 (+)
G813071 NA other downstream 29322 48959749 ~ 48959991 (+)
G813139 NA other downstream 184710 49115137 ~ 49115618 (+)
G815428 NA other downstream 1865787 50796214 ~ 50800381 (+)
G815610 NA other downstream 2148020 51078447 ~ 51078942 (+)

Expression


Co-expression Network