XLOC_027166


Basic Information

Item Value
gene id XLOC_027166
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 12063991 ~ 12065363 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057646
AAACATGTCTAGACCGTTTTACACACAGATGCTGCAGATGACAGCTCACTTACAgtggtttaaaaacaataaacaacacgtTTTCCAGCTTATCAACACACAATAAGGACGCACAATGTGATAAAGAGTGTCTGGAGTGTCAAACGACTCACCTAATGAGGCATGTGTTTGGACCGTACAGTCAACAGGCGCATCGTTTTGGGACGTTTGGACCACATGTGGACCACCGATGGACATCAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057646 True 240 lncRNA 0.45 2 12063991 12065363

Neighbor

gene id symbol gene type direction distance location
XLOC_027165 NA coding upstream 11321 12039649 ~ 12052670 (+)
XLOC_027164 tnnt2c coding upstream 30125 12031958 ~ 12033866 (+)
XLOC_027163 cry1a coding upstream 37484 12013043 ~ 12026507 (+)
XLOC_027162 NA coding upstream 113065 11946875 ~ 11950926 (+)
XLOC_027161 NA coding upstream 270208 11789799 ~ 11793783 (+)
XLOC_027167 tmem178b coding downstream 45791 12111154 ~ 12239160 (+)
XLOC_027168 mkrn1 coding downstream 226911 12292274 ~ 12307834 (+)
XLOC_027169 tmem121b coding downstream 243613 12308976 ~ 12312976 (+)
XLOC_027170 pimr214 coding downstream 267805 12333168 ~ 12361683 (+)
XLOC_027171 pimr170 coding downstream 283205 12348568 ~ 12352645 (+)
XLOC_027160 NA non-coding upstream 291392 11761954 ~ 11772599 (+)
XLOC_027158 NA non-coding upstream 435379 11628170 ~ 11628612 (+)
XLOC_027175 NA non-coding downstream 687191 12752554 ~ 12755202 (+)
XLOC_027176 NA non-coding downstream 747837 12813200 ~ 12819377 (+)
XLOC_027179 NA non-coding downstream 914149 12979512 ~ 12980325 (+)
XLOC_027181 NA non-coding downstream 915333 12980696 ~ 12985047 (+)
XLOC_027182 NA non-coding downstream 931757 12997120 ~ 13024021 (+)

Expression


Co-expression Network