G813074 (etbr2)


Basic Information

Item Value
gene id G813074
gene name etbr2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 48962187 ~ 49006710 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU924993
TCTATATACAGacatttacagaaatattcaACATTGACAATAGTTATGCTCCTTTAAGCTTAGGAATCACGTTCATGTTTATAGAGGATGTGCCTTGCTTTAAAAGGTAGTTGCTGTTAGATTGGTCACAGGTCGTAACTGTTTTTATACAACTGTTATATTACATTGTTAACTACTGTATGTTCTATACTTATTGCTAAAAAGGCATATGGCAAACTACCAACTGTAATCATTTGCCAGCAAATAATGGCTAAATAACCATCAAATCAGCTACTTTGGTTTATTTCATATAAATCCATGCTGTATAcatgattataaactgggtggttcgagcactgaatgctgattggctgacacccGTGGTATAACAGAACGTATACCACaggaatgacaaaacatttatttttactgctctaattacgttggtaaccagtttataatagcaataaggcacctcagaggTTTGTGGTgtttggccaatataccacggctaagggctgtattcaGGCATTCCGCTTTGcgtcgtgcgtaagaacagcccatagccacctcctcgtgccttattgcttaactataaactgggtggttcgagccctgaatgctgattggctgacagccgtggtatatcagaccaatgtatatgaccaatatatacatatatgacaaaTATACCACAACTAAGCGCTGTATCCAGGCATTCTGCGATGCGTCGTGCAtatgaacagcccttagctgtggtatattggtcatataccacaccccctcagccCTTATTTGCTTAATTATATCACAATGTAATTCAACTTCCAGCAATGTCCAGTTCAGCtccagatagtgtgtgtgtgtgtttgtgtgtgtgtgtgtgggggggggggggggggggggggggggggggatcaaaccCACCTCCATATATGGTACCACTCTGCATGAGATGTCCCCCAGCAGCCTCTTATTGGTGAGCTCATTGAAGACCACCACAGGTAAACAGAAGCAGAGCACCAGGAAATCCCAGAAAGCCAAGCTGGCCAGGATGTAGTTCCAGGCACTCCTCATGTAGTAGTTGTGCCAGACGATGCACATCACAGCCAGGTTCCCTATAATCCCCACAGCGAACACCACCAGGGACAGGAACATGACAGCGTAGGCAGTGTAGGAGCTGTCAGTCACTGGGTACAGAGGGTTGTGGATGTGGGTGATGCCCCGCTCTGTGGTGCTGGTATTGTCCTGGTCCCCATCTGTGTTGGCTCCAGTGTCTAGGGTTGAGTTAGAGAACTGGGTGGCTCTGGGTGTGGTGAAGAATTCATTCTCATAAGACTGTGAGAAGGTAGACTGAGGTTCACCTGCGTCTGTGTCCATGGTCTCTGCGCCCCGCGGCGCTCTCTTGTGCTGTTTGTCAAATTGCAGTTGTTTTACATCCTCATCACCATAACCATGGCTTTGAATGACTTGAATGTCGAGATTTGACATATCCTTTTCAACAGATGCACTGTTTGTCTGTGGAACATTTTTTGCATCGGAAGCCCACACTGTCAATAGTATCACCAATGAAATAAAGGGAATCATCGTGAGATGAGTAGCCTGAAAAGTAGATTTTCTTTAAATTCCAAAACTTGACAGCTTTGATCACTGCAGGAGACGTGGTAAAAATGAGGCCCCTCAGCAGAAGTTAATTtaggagaagagaagaatgtgCCAATCCGTGGTGAGATGCTGAAGCTTGGGGAACTCTCTCTCTGCGTCCTGTGGCTGCAGTCCT
>TU924996
AACACTACAGCCGGATTTACATCTCAGAACCATTTTTTCTCTTATTCACAAAATGAGGTGACTTCTCTCTTGACCTTCTTATAACCGGTTGATAACCTTGACCTCTGTACAGTGACTTTTCATGATGATCTCGTCAAATATTTATTATTCACAGCACTTTGATGGAAATTACTACGTCTTAACCATCCCTCTTGATTATTAATAAAACTCAAAGTAATAATGTATACAGTGATACGGGATGGCTAAAGATGAATTAGCTCCATctggagttgggggggggggggggggggggcatgaagAAAATTCTATGGCACACTTGTCTGTGTTGGCTAGTGAGAGAACACACATTGTTTAACAGATATGTAAATAGGCTGTGACATCAAAAATAATTATCTCAGTGCCCCACACTCTGAGGCTCCAAGGGAATGTTAGTTAGTCAAACCTATCATAATAATCTAACATAATACTCAGTTTATCTTGATCTAATAATCCGTAGGATGAAAACATTGGGGTGACACTTCTACAAAGATATTAAATGGAGCTCTTCTCCTAATCTGCACTTAGTCAGTCTTAACTTCCTGTAAAATGAACCACCTTAAAACTGGATGGGGTGTGGTCTCTATTTGGAGAGAACATCAAAAGGAGAGACATTACAGACTTTAAAGGTACAGAGAAGGTGACACTGACAATGGTCCCAGTCCTCTGACTAATAACACTGAAAACAAAAGGCGTGTCCATGGAGAGATCCAGCATCTGATCCCTGTGTGGTGGGACtggggaggaaagggggtgagGTTGAGGTTGGAATGTCCACTGCTGAAAAGTGAGTTGTTTTGTTACCACATCTAATCAGGTTAGGTGATAGGATGGAAAGAAAAGGCAGGCAGGAGAAGCCAATTCAGCTGGACCCGCTGATTGACAGGATGGTGGAGCTGTCCTTGGCTTTGTCAAAGAAGATGGAGGATGTGCTCTTGAGTTTGGCCTCAGTGCCAGGGGAAGAGGAACTGCCGGGTTGGCACTCctcacagcagcagcagcagcagtccatGAAGGCCTGGCCCAGGGACTTACAGAGGCACAACAGCAGCACCGGCGTCACCGACGACTTGAAGAACAAGAAAAACTGGTTGATGAGGGCCAGTAGGGTGGCGGTGTCATCAGAGATGGGCATGGCGGTGTAGGCCAGAACGATGTTGCACACGTTCTCCGGCAGGGCGCAGATGCCATAGACCACGGCCAGGGCCATCACGGTGCAGTTGAGCTGGCGCTCCAcctgttgactgtgttgtatctTCTGCTTCTTGGAGGGGGAGCGCTCCTCCAGACGCTCAGGGATACCGTCATTGGACACGTGGCAGGTGGCCAGCTGGCACAGCAGGGTGAAGACTACAGGCAGGCAGAAGTAGCAGCCAAAGTACCACCACATGCGGCACTCGTGGTAGTTGATGACCAGGGCGTAGATGGACTCGGGAAGGTTGGAGGTAGGGTTCATGGTGCAGGAGTCCATCAAGGCCCCTGTGGCTGGAGACACGGCCTGGCTGAGCTGCCATAGGAGCAGCTCTGGGGCCGCCAGCACCATGGAACCAACCCAGATGACCAGCAGCTTGGCCAGGACGGACTGACAGCGCTCCACCCGACGGGTCTTGGGCTGGGAGCTAGTGGTAGCATTAAAGCGGTCGATACCCAGGGCACACAGGCTGAAGGAAGTCACCCCTAGGGAAGTCACCTCATATATGGTACCACTCTGCATGAGATGTCCCCCAGCAGCCTCTTATTGGTGAGCTCATTGAAGACCACCACAGGTAAACAGAAGCAGAGCACCAGGAAATCCCAGAAAGCCAAGCTGGCCAGGATGTAGTTCCAGGCACTCCTCATGTAGTAGTTGTGCCAGACGATGCACATCACAGCCAGGTTCCCTATAATCCCCACAGCGAACACCACCAGGGACAGGAACATGACAGCGTAGGCAGTGTAGGAGCTGTCAGTCACTGGGTACAGAGGGTTGTGGATGTGGGTGATGCCCCGCTCTGTGGTGCTGGTATTGTCCTGGTCCCCATCTGTGTTGGCTCCAGTGTCTAGGGTTGAGTTAGAGAACTGGGTGGCTCTGGGTGTGGTGAAGAATTCATTCTCATAAGACTGTGAGAAGGTAGACTGAGGTTCACCTGCGTCTGTGTCCATGGTCTCTGCGCCCCGCGGCGCTCTCTTGTGCTGTTTGTCAAATTGCAGTTGTTTTACATCCTCATCACCATAACCATGGCTTTGAATGACTTGAATGTCGAGATTTGACATATCCTTTTCAACAGATGCACTGTTTGTCTGTGGAACATTTTTTGCATCGGAAGCCCACACTGTCAATAGTATCACCAATGAAATAAAGGGAATCATCGTGAGATGAGTAGCCTGAAAAGTAGATTTTCTTTAAATTCCAAAACTTGACAGCTTTGATCACTGCAGGAGACGTGGTAAAAATGAGGCCCCTCAGCAGAAGTTAATTtaggagaagagaagaatgtgCCAATCCGTGGTGAGATGCTGAAGCTTGGGGAACTCTCTCTCTGCGTCCTGTGGCTGCAGTCCT

Function

NR:

description
LOW QUALITY PROTEIN: prosaposin receptor GPR37L1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU924993 False 1759 lncRNA 0.45 2 48962187 49006710
TU924996 True 2578 TUCP 0.49 2 49003319 49006710

Neighbor

gene id symbol gene type direction distance location
klhdc8b LOC106572099 coding upstream 26855 48831069 ~ 48935332 (+)
si:dkey-32e6.3 LOC106572098 coding upstream 172442 48782956 ~ 48789745 (+)
usp19 NA coding upstream 179448 48747659 ~ 48782739 (+)
lamb2 LOC106572101 coding upstream 214663 48699212 ~ 48747524 (+)
lamb2l LOC106572102 coding upstream 263803 48637537 ~ 48698384 (+)
LOC110532282 LOC106572092 coding downstream 6453 49013163 ~ 49060073 (+)
LOC110532283 LOC106572090 coding downstream 56978 49063688 ~ 49081175 (+)
LOC110532284 LOC106572089 coding downstream 79114 49085824 ~ 49097702 (+)
LOC110532286 LOC106572086 coding downstream 153737 49160447 ~ 49161689 (+)
mrgbp mrgbp coding downstream 156839 49163549 ~ 49167417 (+)
G812969 NA non-coding upstream 18758 48942199 ~ 48943429 (+)
G812968 NA non-coding upstream 22600 48939159 ~ 48939587 (+)
G813060 NA non-coding upstream 31760 48930216 ~ 48930427 (+)
G813052 LOC106575331 non-coding upstream 46579 48915276 ~ 48915608 (+)
G813047 NA non-coding upstream 51716 48910176 ~ 48910471 (+)
G813099 NA non-coding downstream 4624 49011334 ~ 49011612 (+)
G813100 NA non-coding downstream 4936 49011646 ~ 49011948 (+)
G813125 NA non-coding downstream 75614 49082324 ~ 49082584 (+)
G813128 NA non-coding downstream 78207 49084917 ~ 49085116 (+)
G813135 NA non-coding downstream 96873 49103583 ~ 49103820 (+)
G813071 NA other upstream 2196 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 391594 48545454 ~ 48570593 (+)
G812143 NA other upstream 979886 47982001 ~ 47982301 (+)
G809685 NA other upstream 2826455 46134731 ~ 46135732 (+)
G807841 NA other upstream 4509110 44442662 ~ 44453077 (+)
G813139 NA other downstream 108427 49115137 ~ 49115618 (+)
G815428 NA other downstream 1789504 50796214 ~ 50800381 (+)
G815610 NA other downstream 2071737 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 2338662 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 3316561 52323001 ~ 52325924 (+)
LOC110532278 LOC105027762 coding upstream 5034 48994635 ~ 48998285 (+)
LOC110532277 LOC106572094 coding upstream 8784 48988442 ~ 48994535 (+)
G813076 NA non-coding upstream 27934 48967764 ~ 48975385 (+)

Expression


Co-expression Network