G813125


Basic Information

Item Value
gene id G813125
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49082324 ~ 49082584 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU925049
gcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgaacacaccatccccactgtcaaacatggtggtggaagcatcatggtttgggcctgct

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU925049 True 261 lncRNA 0.44 1 49082324 49082584

Neighbor

gene id symbol gene type direction distance location
LOC110532283 LOC106572090 coding upstream 1149 49063688 ~ 49081175 (+)
LOC110532282 LOC106572092 coding upstream 22251 49013163 ~ 49060073 (+)
LOC110532278 LOC105027762 coding upstream 84039 48994635 ~ 48998285 (+)
LOC110532277 LOC106572094 coding upstream 87789 48988442 ~ 48994535 (+)
klhdc8b LOC106572099 coding upstream 146992 48831069 ~ 48935332 (+)
LOC110532284 LOC106572089 coding downstream 3240 49085824 ~ 49097702 (+)
LOC110532286 LOC106572086 coding downstream 77863 49160447 ~ 49161689 (+)
mrgbp mrgbp coding downstream 80965 49163549 ~ 49167417 (+)
LOC118966186 NA coding downstream 101797 49184381 ~ 49186162 (+)
sulf2b LOC106572085 coding downstream 230602 49313186 ~ 49493787 (+)
G813100 NA non-coding upstream 70376 49011646 ~ 49011948 (+)
G813099 NA non-coding upstream 70712 49011334 ~ 49011612 (+)
G813074 etbr2 non-coding upstream 75614 48962187 ~ 49006710 (+)
G813076 NA non-coding upstream 106939 48967764 ~ 48975385 (+)
G812969 NA non-coding upstream 138895 48942199 ~ 48943429 (+)
G813128 NA non-coding downstream 2333 49084917 ~ 49085116 (+)
G813135 NA non-coding downstream 20999 49103583 ~ 49103820 (+)
G813137 NA non-coding downstream 23394 49105978 ~ 49106213 (+)
G813140 NA non-coding downstream 33099 49115683 ~ 49116087 (+)
G813160 NA non-coding downstream 67879 49150463 ~ 49150752 (+)
G813071 NA other upstream 122333 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 511731 48545454 ~ 48570593 (+)
G812143 NA other upstream 1100023 47982001 ~ 47982301 (+)
G809685 NA other upstream 2946592 46134731 ~ 46135732 (+)
G813139 NA other downstream 32553 49115137 ~ 49115618 (+)
G815428 NA other downstream 1713630 50796214 ~ 50800381 (+)
G815610 NA other downstream 1995863 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 2262788 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 3240687 52323001 ~ 52325924 (+)

Expression


Co-expression Network