G813450


Basic Information

Item Value
gene id G813450
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49095154 ~ 49096557 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU925395
CTACGGTGATATACGCCCACATTGGTTATGGTTCTCTACGGTGATATACGCCCACATTTATTGCAAACAAAATAGATATCGGTTCTTGAACATAGAATCATAAACTTTGACTTGCACAAGTACAATAGGAGAAAAAAAGAAGAGAAAAAAGTACATTTCTTAAAATGATAGGGTTACTGAACTTCACCAggcaggatgtggacatgatctTTACCAAAACTGCTCCATCTTAAAGCCCTAAAATGAAAAAGCTTCTCCCTTGTCTTTCTGAACCTGAAACACACTGCGCCAAACTGCAAAAGGCCAGAAAGAAAATACATTATTAAAGCAAAGCACTTACAACCTAAAGCAAGAGGAGGCATGGTTCTTTTGACACTGTCTCCACCTGCAGGTACATTTCAGTCACTGCATGGGACCTCTAACTACAATACTAAACATAGTTTCCATATAACAGACTTCTCTGATTTGACATGACAGAGTATGACTCACGTAAATAGTAGTGTCATAGCAAATGTGCATAAAAATATCAAAATGTGATCGATTTCCCAAGTTCAGTTACTTCTTAATGCTATGATCTGAACTCTTGAGCTATTATTACCACTATACTGACTAACATGTCAGGTACCATGTACTTACACACATGACTAAATTGGCACAATTATACATTGAGACTAGTACAGTAGTACATAGTTAGATGTCTTTGTTGAAGCCAAAGACTTCCAGACCAGAGAAGCCAGGTGCCATTCATATAGATACCAACGGTCGAGTTCCATGGGGTTAACGTCCATGTGAAGCGTGTATGGCACAATGGTAAACTCATCTCCCGCGTCCCTAACACCATCCTATTATACTTCACATTCTCTATGACAAAGGCATTTGTATATCAAAACCAAGAATGGACTTGGTACAGAGATCAAACTAGACAATCATTGCAAATAAATCAGGCTGGGAGAGTAAAATGTTTctgaaaattaaaataaaaaacatgttcaGCTTCCTGTGATATTGCAGAaccccccccttcccctcccctaaACAACAACACTTATTCCGTTTTAAAATTCTGGCctttcaaataaaataacaacaaaaaatatagaaGAAACAGACACCGGATAAGCTGTTGTACAATTTGTGTAACAAACCACTTTTGAACTTCAAAATATCCCAATGTCAAAACAGTTACTTAATAAACCAGCCGTTTCCCTGTACAGCACGGCACTTGGGAAACGTGTAGAGAGGTGGGCTGATGTGAAATGTGGTGGCAGCCAGTGATGGACGAGTTTCTGGAAACTGTCGTCATTTATCTTTTTTCTCAGCCTCTGTGATCTCTTCTTTCGCTGCAGCGTCTTCCGGAGAGACTTCCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU925395 True 1369 lncRNA 0.39 2 49095154 49096557

Neighbor

gene id symbol gene type direction distance location
LOC110532281 LOC106572093 coding downstream 31649 49060071 ~ 49063505 (-)
LOC110532280 etbr2 coding downstream 88387 49003288 ~ 49006767 (-)
LOC110532275 LOC106572096 coding downstream 116020 48962163 ~ 48979134 (-)
LOC110532274 LOC106572097 coding downstream 136042 48948869 ~ 48959112 (-)
LOC110532266 LOC106572105 coding downstream 506593 48585633 ~ 48588561 (-)
LOC110532296 myh7b coding upstream 658463 49755020 ~ 49771887 (-)
LOC110531196 NA coding upstream 709575 49806132 ~ 49818757 (-)
LOC110532299 LOC106572073 coding upstream 724417 49820974 ~ 49824793 (-)
LOC110532301 NA coding upstream 885840 49982397 ~ 49985562 (-)
kcnd1 LOC106572071 coding upstream 903553 50000110 ~ 50072237 (-)
G813386 NA non-coding downstream 119862 48967335 ~ 48975292 (-)
G813383 NA non-coding downstream 135422 48959507 ~ 48959732 (-)
G813373 NA non-coding downstream 149901 48944973 ~ 48945253 (-)
G813372 NA non-coding downstream 151721 48941755 ~ 48943433 (-)
G813466 NA non-coding upstream 33769 49130326 ~ 49130558 (-)
G813472 NA non-coding upstream 41575 49138132 ~ 49138338 (-)
G813492 NA non-coding upstream 64567 49161124 ~ 49161688 (-)
G813506 NA non-coding upstream 75944 49172501 ~ 49172718 (-)
G813521 NA non-coding upstream 83698 49180255 ~ 49180476 (-)
G813357 LOC106578276 other downstream 179450 48915435 ~ 48915704 (-)
G812840 NA other downstream 586060 48508645 ~ 48509094 (-)
LOC110532252 fkb1a other downstream 808724 48278174 ~ 48286453 (-)
LOC110531190 clcn6 other downstream 1418505 47642136 ~ 47676649 (-)
G811300 NA other downstream 1913357 47178804 ~ 47181797 (-)
G814020 NA other upstream 367400 49463957 ~ 49466762 (-)
G814157 edem2 other upstream 638588 49735145 ~ 49736111 (-)
G815044 NA other upstream 1121799 50218356 ~ 50218697 (-)
G815045 NA other upstream 1122310 50218867 ~ 50219848 (-)
G817848 NA other upstream 3056725 52153282 ~ 52153642 (-)

Expression


Co-expression Network