G813711


Basic Information

Item Value
gene id G813711
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49500842 ~ 49501074 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU925682
aTTGTGATTACTACTGGCTCAGGCCACTGCTGTTGTAGAGTTGTTGTAATGGCTTTCCCTCTTCCAGTGCTCCTCCCCATTCACCTGTTTCTCCACTCTTTCCTTTCACCAATGTTCTGTGAGCCCAGGCACAGAACATTGCACTGTTTTTACTGATCAGGGTCAGTTTGTGCTGACTGGGAGTTTGGGCCGAAAAGCTGCATTGTTGGGCCACTGACTGCCGGATGAACCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU925682 True 233 lncRNA 0.50 1 49500842 49501074

Neighbor

gene id symbol gene type direction distance location
sulf2b LOC106572085 coding upstream 7055 49313186 ~ 49493787 (+)
LOC118966186 NA coding upstream 314680 49184381 ~ 49186162 (+)
mrgbp mrgbp coding upstream 333425 49163549 ~ 49167417 (+)
LOC110532286 LOC106572086 coding upstream 339153 49160447 ~ 49161689 (+)
LOC110532284 LOC106572089 coding upstream 403140 49085824 ~ 49097702 (+)
phf20b LOC106572082 coding downstream 114564 49615638 ~ 49639251 (+)
ndrg3b LOC106572081 coding downstream 139334 49640408 ~ 49716462 (+)
LOC110532294 LOC106572080 coding downstream 218027 49719101 ~ 49725551 (+)
edem2 edem2 coding downstream 224633 49725707 ~ 49737456 (+)
LOC118966066 trpc4ap coding downstream 240789 49741863 ~ 49743326 (+)
G813704 NA non-coding upstream 35743 49464330 ~ 49465099 (+)
G813524 NA non-coding upstream 318867 49181768 ~ 49181975 (+)
G813510 NA non-coding upstream 325425 49175198 ~ 49175417 (+)
G813507 NA non-coding upstream 327053 49173570 ~ 49173789 (+)
G813505 NA non-coding upstream 327890 49172712 ~ 49172952 (+)
G813713 NA non-coding downstream 3662 49504736 ~ 49504972 (+)
G813719 NA non-coding downstream 11893 49512967 ~ 49513186 (+)
G813720 NA non-coding downstream 12327 49513401 ~ 49513612 (+)
G813722 NA non-coding downstream 13460 49514534 ~ 49514761 (+)
G813723 NA non-coding downstream 14821 49515895 ~ 49517255 (+)
G813139 NA other upstream 385224 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 494132 48962187 ~ 49006710 (+)
G813071 NA other upstream 540851 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 930249 48545454 ~ 48570593 (+)
G812143 NA other upstream 1518541 47982001 ~ 47982301 (+)
G815428 NA other downstream 1295140 50796214 ~ 50800381 (+)
G815610 NA other downstream 1577373 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 1844298 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 2822197 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 3225347 52692676 ~ 52734929 (+)

Expression


Co-expression Network