G813722


Basic Information

Item Value
gene id G813722
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49514534 ~ 49514761 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU925693
ttGAAGATCAGTCCTCAACTCTGTATGAGGCTCAACTGAGGGAAATGGGCTTGTTTCATTTGGTTTCTGCATCACATCAGTCAGTTTAGACAGCAGCACCCTACAGTGATCAGGCACAGATCCCTCTCAAAGCCAAGGCTGCCGAGTCAAACGCCTCGGGGAGCATTCTGGAACACAGAGAGCGAGACCAAACAGCCAGACAGATTGTAAAGGTTCCGTGTCTCATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU925693 True 228 lncRNA 0.50 1 49514534 49514761

Neighbor

gene id symbol gene type direction distance location
sulf2b LOC106572085 coding upstream 20747 49313186 ~ 49493787 (+)
LOC118966186 NA coding upstream 328372 49184381 ~ 49186162 (+)
mrgbp mrgbp coding upstream 347117 49163549 ~ 49167417 (+)
LOC110532286 LOC106572086 coding upstream 352845 49160447 ~ 49161689 (+)
LOC110532284 LOC106572089 coding upstream 416832 49085824 ~ 49097702 (+)
phf20b LOC106572082 coding downstream 100877 49615638 ~ 49639251 (+)
ndrg3b LOC106572081 coding downstream 125647 49640408 ~ 49716462 (+)
LOC110532294 LOC106572080 coding downstream 204340 49719101 ~ 49725551 (+)
edem2 edem2 coding downstream 210946 49725707 ~ 49737456 (+)
LOC118966066 trpc4ap coding downstream 227102 49741863 ~ 49743326 (+)
G813720 NA non-coding upstream 922 49513401 ~ 49513612 (+)
G813719 NA non-coding upstream 1348 49512967 ~ 49513186 (+)
G813713 NA non-coding upstream 9562 49504736 ~ 49504972 (+)
G813711 NA non-coding upstream 13460 49500842 ~ 49501074 (+)
G813704 NA non-coding upstream 49435 49464330 ~ 49465099 (+)
G813723 NA non-coding downstream 1134 49515895 ~ 49517255 (+)
G813731 NA non-coding downstream 24655 49539416 ~ 49539715 (+)
G813732 NA non-coding downstream 25409 49540170 ~ 49540477 (+)
G813740 NA non-coding downstream 39184 49553945 ~ 49554402 (+)
G813742 NA non-coding downstream 42530 49557291 ~ 49557573 (+)
G813139 NA other upstream 398916 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 507824 48962187 ~ 49006710 (+)
G813071 NA other upstream 554543 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 943941 48545454 ~ 48570593 (+)
G812143 NA other upstream 1532233 47982001 ~ 47982301 (+)
G815428 NA other downstream 1281453 50796214 ~ 50800381 (+)
G815610 NA other downstream 1563686 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 1830611 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 2808510 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 3211660 52692676 ~ 52734929 (+)

Expression


Co-expression Network