XLOC_027171 (pimr170)


Basic Information

Item Value
gene id XLOC_027171
gene name pimr170
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 12348568 ~ 12352645 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053549
AGCGAGTAAAGAAGAAAAGGACGTCTGGAAGTCTAGTAGAGCTTCTGCTTCAGAAGACCATGTCCCTGCTGCTGAGCAGCTAGAGGAGGACGACACAGAAAATGACACCATTTTAAGGCATTATGAAATGGGTGACAAGCTGGGCAAAGGTGGATTCGGCTCTGTCTACAAAGCCACACGCCGCAGGGATGGACTTGAGGTTGCTGTGAAATGTACTGTCAAGTCACCGAAGATGAAGGAAATGACAGTGCCTGGTTATGACAAACCCCTCCCTACAGAAATTGCCCTGACAATCATGGCCAACAATGGTCCCTACGTCCCCGAGATAATCCAACTCCTAGACTGGGAGGACAACGATGCCCACTACATTATAATCATGGAGCGACCCATACCTTGTATGGACTTGCTTCACTTCTTACGCCACAAGGATGGACCTCTTGATGAGAAGACGGGACGCCATATAATGCGGCAGGCCATTCATGCTGTGAGCGTTTGCTTTGATCGCGGTGTCTTCCATCGGGACATAAAACTTGAAAACCTCCTGGTGAATCCAGACACTTTGGAGGTAAAGCTAATAGACTTCGGCTGTGGTGCGATCGTAAAGGATTCCGGCTACAAAGTCTTCTGTGgcACAAGAAAATATTTCCCTCCGGAGTACGAATTGCATGGCAGGTACCATGCACAGCCGGCGACTGTTTGGTCTCTAGGGATCGTCCTGTTCGCAATGATGTGTGGGGCTTTACCCACTGTCTCCGACCACTCCTTGATCAGGGACTATCTTTGGTCTAGCCCTGGCCTGTCAATAGAATGCTGCCAGATGATCTGCGGTTGTCTACAGCCAAACCCAGATGAGAGACTCGCTCTGCAGGAGATGCATCTCCATAACTGGTTTAAGGTCATGGAGTAAGACAGGAGAAACAACTCAGCAACCCTAGCACACCTGAGGACTGCTGCATTGGATTGCTCTTTGTATTATATTGTTGCCTTGTCATCTTCTTTAATAGTGCAGGGCAACTTACATATGAGTGCTTTTGTTGATTAATTAATATGTCATGAATGTTT

Function

symbol description
pimr170 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000074873

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053549 True 1062 mRNA 0.48 8 12348568 12352645

Neighbor

gene id symbol gene type direction distance location
XLOC_027169 tmem121b coding upstream 35592 12308976 ~ 12312976 (+)
XLOC_027168 mkrn1 coding upstream 40734 12292274 ~ 12307834 (+)
XLOC_027167 tmem178b coding upstream 109408 12111154 ~ 12239160 (+)
XLOC_027166 NA coding upstream 283205 12063991 ~ 12065363 (+)
XLOC_027165 NA coding upstream 295898 12039649 ~ 12052670 (+)
XLOC_027172 pimr169 coding downstream 13130 12365775 ~ 12369666 (+)
XLOC_027173 lmo3 coding downstream 259500 12612145 ~ 12679293 (+)
XLOC_027174 AL954848.1 coding downstream 349795 12702440 ~ 12724404 (+)
XLOC_027175 NA coding downstream 399909 12752554 ~ 12755202 (+)
XLOC_027176 NA coding downstream 460555 12813200 ~ 12819377 (+)
XLOC_027162 NA non-coding upstream 397642 11946875 ~ 11950926 (+)
XLOC_027161 NA non-coding upstream 554785 11789799 ~ 11793783 (+)
XLOC_027160 NA non-coding upstream 575969 11761954 ~ 11772599 (+)
XLOC_027179 NA non-coding downstream 626867 12979512 ~ 12980325 (+)
XLOC_027181 NA non-coding downstream 628051 12980696 ~ 12985047 (+)
XLOC_027182 NA non-coding downstream 644475 12997120 ~ 13024021 (+)

Expression


Co-expression Network