G813742


Basic Information

Item Value
gene id G813742
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49557291 ~ 49557573 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU925715
GTTATCCTCTAAAAGCTCAGCTGCACTGATAGCCTTTGACAAGGCTGTAGAGTCTGCTTGCACGTGTAGAGTGATAGCTTAGATGTGAATCATAACAATCATATGTGTGCTTGCTTATTTTCACACAGGCACATCTATGTGCACCCTTGTCATATTAAGATATTTGGATGATTTATGAGTAATTTGTGTATTGAAACAGGGACATTTGATAGAGTATTTTTTTCCCACTGCTCAATTTGTTTTTGATTGCCTTGACTTTTTGACGTGAGACCTTTGCATATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU925715 True 283 lncRNA 0.38 1 49557291 49557573

Neighbor

gene id symbol gene type direction distance location
sulf2b LOC106572085 coding upstream 63504 49313186 ~ 49493787 (+)
LOC118966186 NA coding upstream 371129 49184381 ~ 49186162 (+)
mrgbp mrgbp coding upstream 389874 49163549 ~ 49167417 (+)
LOC110532286 LOC106572086 coding upstream 395602 49160447 ~ 49161689 (+)
LOC110532284 LOC106572089 coding upstream 459589 49085824 ~ 49097702 (+)
phf20b LOC106572082 coding downstream 58065 49615638 ~ 49639251 (+)
ndrg3b LOC106572081 coding downstream 82835 49640408 ~ 49716462 (+)
LOC110532294 LOC106572080 coding downstream 161528 49719101 ~ 49725551 (+)
edem2 edem2 coding downstream 168134 49725707 ~ 49737456 (+)
LOC118966066 trpc4ap coding downstream 184290 49741863 ~ 49743326 (+)
G813740 NA non-coding upstream 2889 49553945 ~ 49554402 (+)
G813732 NA non-coding upstream 16814 49540170 ~ 49540477 (+)
G813731 NA non-coding upstream 17576 49539416 ~ 49539715 (+)
G813723 NA non-coding upstream 40036 49515895 ~ 49517255 (+)
G813722 NA non-coding upstream 42530 49514534 ~ 49514761 (+)
G813743 NA non-coding downstream 435 49558008 ~ 49558227 (+)
G813744 NA non-coding downstream 2651 49560224 ~ 49560434 (+)
G813746 NA non-coding downstream 4490 49562063 ~ 49562297 (+)
G813747 NA non-coding downstream 5980 49563553 ~ 49563818 (+)
G813769 NA non-coding downstream 44395 49601968 ~ 49602398 (+)
G813139 NA other upstream 441673 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 550581 48962187 ~ 49006710 (+)
G813071 NA other upstream 597300 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 986698 48545454 ~ 48570593 (+)
G812143 NA other upstream 1574990 47982001 ~ 47982301 (+)
G815428 NA other downstream 1238641 50796214 ~ 50800381 (+)
G815610 NA other downstream 1520874 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 1787799 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 2765698 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 3168848 52692676 ~ 52734929 (+)

Expression


Co-expression Network