G813746


Basic Information

Item Value
gene id G813746
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49562063 ~ 49562297 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU925719
AGAAAAGGTGTGGAGATTGATTGAAGGTTTTCTGTTCTGGCAAGTCCATCAATCtttgtgagaaggagagaggagacatgaggagagAAATAAACaggtgagaggtggagagagacagaaacagagagggtaCTAGCCTGCGTTGGAGAGAGGGTATTGTAGTGGTGAGAGTATGATCCTTGAGAGGGCAGTGAGTAGTGGAGTACtgtgagaggagagtagaggagagtagaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU925719 True 235 lncRNA 0.47 1 49562063 49562297

Neighbor

gene id symbol gene type direction distance location
sulf2b LOC106572085 coding upstream 68276 49313186 ~ 49493787 (+)
LOC118966186 NA coding upstream 375901 49184381 ~ 49186162 (+)
mrgbp mrgbp coding upstream 394646 49163549 ~ 49167417 (+)
LOC110532286 LOC106572086 coding upstream 400374 49160447 ~ 49161689 (+)
LOC110532284 LOC106572089 coding upstream 464361 49085824 ~ 49097702 (+)
phf20b LOC106572082 coding downstream 53341 49615638 ~ 49639251 (+)
ndrg3b LOC106572081 coding downstream 78111 49640408 ~ 49716462 (+)
LOC110532294 LOC106572080 coding downstream 156804 49719101 ~ 49725551 (+)
edem2 edem2 coding downstream 163410 49725707 ~ 49737456 (+)
LOC118966066 trpc4ap coding downstream 179566 49741863 ~ 49743326 (+)
G813744 NA non-coding upstream 1629 49560224 ~ 49560434 (+)
G813743 NA non-coding upstream 3836 49558008 ~ 49558227 (+)
G813742 NA non-coding upstream 4490 49557291 ~ 49557573 (+)
G813740 NA non-coding upstream 7661 49553945 ~ 49554402 (+)
G813732 NA non-coding upstream 21586 49540170 ~ 49540477 (+)
G813747 NA non-coding downstream 1256 49563553 ~ 49563818 (+)
G813769 NA non-coding downstream 39671 49601968 ~ 49602398 (+)
G813789 NA non-coding downstream 77923 49640220 ~ 49658591 (+)
G813798 LOC105030512 non-coding downstream 95361 49657658 ~ 49690004 (+)
G813822 NA non-coding downstream 167111 49729408 ~ 49740600 (+)
G813139 NA other upstream 446445 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 555353 48962187 ~ 49006710 (+)
G813071 NA other upstream 602072 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 991470 48545454 ~ 48570593 (+)
G812143 NA other upstream 1579762 47982001 ~ 47982301 (+)
G815428 NA other downstream 1233917 50796214 ~ 50800381 (+)
G815610 NA other downstream 1516150 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 1783075 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 2760974 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 3164124 52692676 ~ 52734929 (+)

Expression


Co-expression Network