XLOC_027172 (pimr169)


Basic Information

Item Value
gene id XLOC_027172
gene name pimr169
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 12365775 ~ 12369666 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053552
AGCGAGTAAAGAAGAAAAGGACGTCTGGAAGTCTAGTAGAGCTTCTGCTTCAGAAGACCATGTCCCTGCTGCTGAGCAGCTAGAGGAGGACGACACAGAAAATGACACCATTTTAAGGCATTATGAAATGGGTGACAAGCTGGGCAAAGGTGGATTCGGCTCTGTCTACAAAGCCACACGCCGCAGGGATGGACTTGAGGTTGCTGTGAAATGTACTGTCAAGTCACCGAAGATGAAGGAAATGACAGTGCCTGGTTATGACAAACCCCTCCCTACAGAAATTGCCCTGACAATCATGGCCAACAATGGTCCCTACGTCCCCGAGATAATCCAACTCCTAGACTGGGAGGACAACGATGCCCACTACATTATAATCATGGAGCGACCCATACCTTGTATGGACTTGCTTCACTTCTTACGCCACAAGGATGGACCTCTTGATGAGAAGACGGGACGCCATATAATGCGGCAGGCCATTCATGCTGTGAGCGTTTGCTTTGATCGCGGTGTCTTCCATCGGGACATAAAGCTTGAAAACCTCCTGGTGAATCCAGACACTTTGGAGGTAAAGCTAATAGACTTCGGCTGTGGTGCGATCGTAAAGAAATCTGGCTACAAAGTCTTCTGTGGTAAGTGTTATGAACTTTGTTGTCATAAAAACCA
>TCONS_00053553
AGCGAGTAAAGAAGAAAAGGACGTCTGGAAGTCTAGTAGAGCTTCTGCTTCAGAAGACCATGTCCCTGCTGCTGAGCAGCTAGAGGAGGACGACACAGAAAATGACACCATTTTAAGGCATTATGAAATGGGTGACAAGCTGGGCAAAGGTGGATTCGGCTCTGTCTACAAAGCCACACGCCGCAGGGATGGACTTGAGGTTGCTGTGAAATGTACTGTCAAGTCACCGAAGATGAAGGAAATGACAGTGCCTGGTTATGACAAACCCCTCCCTACAGAAATTGCCCTGACAATCATGGCCAACAATGGTCCCTACGTCCCCGAGATAATCCAACTCCTAGACTGGGAGGACAACGATGCCCACTACATTATAATCATGGAGCGACCCATACCTTGTATGGACTTGCTTCACTTCTTACGCCACAAGGATGGACCTCTTGATGAGAAGACGGGACGCCATATAATGCGGCAGGCCATTCATGCTGTGAGCGTTTGCTTTGATCGCGGTGTCTTCCATCGGGACATAAAGCTTGAAAACCTCCTGGTGAATCCAGACACTTTGGAGGTAAAGCTAATAGACTTCGGCTGTGGTGCGATCGTAAAGAAATCTGGCTACAAAGTCTTCTGTGGAACAAGAACATATTTCCCTCCGGAGTACGAATTGCATGGCAGGTACCATGCACAGCCAGCGACTGTTTGGTCTCTAGGGATCGTCCTGTTCGCATTGATGTGTGGGGCTTTACCCACTGTCTCCGACCACTCCTTGATCAGGGACTATCTTTGGTCTAGCCCTGGCCTGTCAATAGAATGCTGCCAGATGATCTGCGGTTGTCTACAGCCAAACCCAGATGAGAGACTCGCTCTGCAGGAGATGCATCTCCATAACTGGTTTAAGGTCATGGAGTAAGACAGGACTAACAACTCAGCAACCCTAGCACATCTGAGGACTGCTGCATTGGATTGCTCTTTGTATTATATTGTTGCCTTGTCATCTTCTTTAATAGTGCAGGGCAACTTACATATGAGTGCTTTTGTTGATTAATTAATATGTCATGAATGTTT
>TCONS_00053554
GTCTTCCATCGGGACATAAAGCTTGAAAACCTCCTGGTGAATCCAGACACTTTGGAGGTAAAGCTAATAGACTTCGGCTGTGGTGCGATCGTAAAGAAATCTGGCTACAAAGTCTTCTGTGGAACAAGAACATATTTCCCTCCGGAGTACGAATTGCATGGCAGGTACCATGCACAGCCAGCGACTGTTTGGTCTCTAGGGATCGTCCTGTTCGCATTGATGTGTGGGGCTTTACCCACTGTCTCCGACCACTCCTTGATCAGGGACTATCTTTGGTCTAGCCCTGGCCTGTCAATAGGTCATGGAGTAAGACAGGACTAACAACTCAGCAACCCTAGCACATCTGAGGACTGCTGCATTGGATTGCTCTTTGTATTATATTGTTGCCTTGTCATCTTCTTTAATAGTGCAGGGCAACTTACATATGAGTGCTTTTGTTGATTAATTAATATGTCATGAATGTTTTGAATGTattgtcattatattattattatacacatatGCAAATGCACTATATATGTCATGTGTGTGTTTCTTATATACTGGTGAATTATTAAAGGATTATAAAATCAACA

Function

symbol description
pimr169 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103215

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053552 False 663 mRNA 0.48 5 12365775 12367700
TCONS_00053553 False 1062 mRNA 0.48 8 12365775 12369556
TCONS_00053554 True 575 mRNA 0.41 3 12367546 12369666

Neighbor

gene id symbol gene type direction distance location
XLOC_027170 pimr214 coding upstream 4092 12333168 ~ 12361683 (+)
XLOC_027171 pimr170 coding upstream 13130 12348568 ~ 12352645 (+)
XLOC_027169 tmem121b coding upstream 52799 12308976 ~ 12312976 (+)
XLOC_027168 mkrn1 coding upstream 57941 12292274 ~ 12307834 (+)
XLOC_027167 tmem178b coding upstream 126615 12111154 ~ 12239160 (+)
XLOC_027173 lmo3 coding downstream 242479 12612145 ~ 12679293 (+)
XLOC_027174 AL954848.1 coding downstream 332774 12702440 ~ 12724404 (+)
XLOC_027175 NA coding downstream 382888 12752554 ~ 12755202 (+)
XLOC_027176 NA coding downstream 443534 12813200 ~ 12819377 (+)
XLOC_027177 wif1 coding downstream 562097 12931763 ~ 12956718 (+)
XLOC_027166 NA non-coding upstream 300412 12063991 ~ 12065363 (+)
XLOC_027165 NA non-coding upstream 313105 12039649 ~ 12052670 (+)
XLOC_027162 NA non-coding upstream 414849 11946875 ~ 11950926 (+)
XLOC_027161 NA non-coding upstream 571992 11789799 ~ 11793783 (+)
XLOC_027160 NA non-coding upstream 593176 11761954 ~ 11772599 (+)
XLOC_027179 NA non-coding downstream 609846 12979512 ~ 12980325 (+)
XLOC_027181 NA non-coding downstream 611030 12980696 ~ 12985047 (+)
XLOC_027182 NA non-coding downstream 627454 12997120 ~ 13024021 (+)

Expression


Co-expression Network