G813789


Basic Information

Item Value
gene id G813789
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49640220 ~ 49658591 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU925769
tgtccacatacttttgtaatgtagtgtatatacaatgtgtacaaaacattaagaacatcttcctaatattgagttgcaccccccctttgccctcagaacaccctcaattcgtcagggcatggactctacaaggcgtcaagtgttccacagggatgctggtccatgttgatgCCAATGATTCCCACACTTgccaagttggctagatgtcttataggtggtggaccatttattgatgcacacaggaaactgtttggtgaaaaacccagtagcgttgcagttcttggcacaaaccggtgcgcctgccactaactaccatacccctttcgaTGGcagttaaatattttgtcttgcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU925769 True 352 lncRNA 0.45 2 49640220 49658591

Neighbor

gene id symbol gene type direction distance location
phf20b LOC106572082 coding upstream 969 49615638 ~ 49639251 (+)
si:ch211-218g4.2 LOC106572084 coding upstream 48238 49494307 ~ 49591982 (+)
sulf2b LOC106572085 coding upstream 146433 49313186 ~ 49493787 (+)
LOC118966186 NA coding upstream 454058 49184381 ~ 49186162 (+)
mrgbp mrgbp coding upstream 472803 49163549 ~ 49167417 (+)
LOC110532294 LOC106572080 coding downstream 60510 49719101 ~ 49725551 (+)
edem2 edem2 coding downstream 67116 49725707 ~ 49737456 (+)
LOC118966066 trpc4ap coding downstream 83272 49741863 ~ 49743326 (+)
LOC110531195 trpc4ap coding downstream 86787 49745378 ~ 49785055 (+)
gss gss coding downstream 130131 49788722 ~ 49797031 (+)
G813769 NA non-coding upstream 37822 49601968 ~ 49602398 (+)
G813747 NA non-coding upstream 76402 49563553 ~ 49563818 (+)
G813746 NA non-coding upstream 77923 49562063 ~ 49562297 (+)
G813744 NA non-coding upstream 79786 49560224 ~ 49560434 (+)
G813743 NA non-coding upstream 81993 49558008 ~ 49558227 (+)
G813822 NA non-coding downstream 70817 49729408 ~ 49740600 (+)
G813870 NA non-coding downstream 153343 49811934 ~ 49812165 (+)
G814225 NA non-coding downstream 180447 49839038 ~ 49839290 (+)
G814281 NA non-coding downstream 220489 49879080 ~ 49879349 (+)
G813139 NA other upstream 524602 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 633510 48962187 ~ 49006710 (+)
G813071 NA other upstream 680229 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 1069627 48545454 ~ 48570593 (+)
G812143 NA other upstream 1657919 47982001 ~ 47982301 (+)
G815428 NA other downstream 1137623 50796214 ~ 50800381 (+)
G815610 NA other downstream 1419856 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 1686781 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 2664680 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 3067830 52692676 ~ 52734929 (+)

Expression


Co-expression Network