Gene
RNA
| Item | Value |
|---|---|
| gene id | G813798 |
| gene name | LOC105030512 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 49657658 ~ 49690004 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109630516 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU925778 | True | 420 | lncRNA | 0.51 | 2 | 49657658 | 49690004 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| phf20b | LOC106572082 | coding | upstream | 18407 | 49615638 ~ 49639251 (+) |
| si:ch211-218g4.2 | LOC106572084 | coding | upstream | 65676 | 49494307 ~ 49591982 (+) |
| sulf2b | LOC106572085 | coding | upstream | 163871 | 49313186 ~ 49493787 (+) |
| LOC118966186 | NA | coding | upstream | 471496 | 49184381 ~ 49186162 (+) |
| mrgbp | mrgbp | coding | upstream | 490241 | 49163549 ~ 49167417 (+) |
| LOC110532294 | LOC106572080 | coding | downstream | 29097 | 49719101 ~ 49725551 (+) |
| edem2 | edem2 | coding | downstream | 35703 | 49725707 ~ 49737456 (+) |
| LOC118966066 | trpc4ap | coding | downstream | 51859 | 49741863 ~ 49743326 (+) |
| LOC110531195 | trpc4ap | coding | downstream | 55374 | 49745378 ~ 49785055 (+) |
| gss | gss | coding | downstream | 98718 | 49788722 ~ 49797031 (+) |
| G813769 | NA | non-coding | upstream | 55260 | 49601968 ~ 49602398 (+) |
| G813747 | NA | non-coding | upstream | 93840 | 49563553 ~ 49563818 (+) |
| G813746 | NA | non-coding | upstream | 95361 | 49562063 ~ 49562297 (+) |
| G813744 | NA | non-coding | upstream | 97224 | 49560224 ~ 49560434 (+) |
| G813743 | NA | non-coding | upstream | 99431 | 49558008 ~ 49558227 (+) |
| G813822 | NA | non-coding | downstream | 39404 | 49729408 ~ 49740600 (+) |
| G813870 | NA | non-coding | downstream | 121930 | 49811934 ~ 49812165 (+) |
| G814225 | NA | non-coding | downstream | 149034 | 49839038 ~ 49839290 (+) |
| G814281 | NA | non-coding | downstream | 189076 | 49879080 ~ 49879349 (+) |
| G813139 | NA | other | upstream | 542040 | 49115137 ~ 49115618 (+) |
| G813074 | etbr2 | other | upstream | 650948 | 48962187 ~ 49006710 (+) |
| G813071 | NA | other | upstream | 697667 | 48959749 ~ 48959991 (+) |
| G812688 | LOC106572106 | other | upstream | 1087065 | 48545454 ~ 48570593 (+) |
| G812143 | NA | other | upstream | 1675357 | 47982001 ~ 47982301 (+) |
| G815428 | NA | other | downstream | 1106210 | 50796214 ~ 50800381 (+) |
| G815610 | NA | other | downstream | 1388443 | 51078447 ~ 51078942 (+) |
| G815767 | casz1 | other | downstream | 1655368 | 51345372 ~ 51346494 (+) |
| LOC110532349 | LOC106591969 | other | downstream | 2633267 | 52323001 ~ 52325924 (+) |
| LOC110532368 | LOC106572016 | other | downstream | 3036417 | 52692676 ~ 52734929 (+) |
