G813870


Basic Information

Item Value
gene id G813870
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49811934 ~ 49812165 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU925855
gctatattgtatttactttgccaccatggccttttttttgcctttacctcccttctcacctcatttgctcacatcgtatatagacttgtttatactgtattattgactgtgtgtttgttttactccatgtgtaactctgtgtcgttgtatctgtcgaactgctttgctttatcttggccaggtcgcaattgtaaatgagaacttgttctcaacttgcctacctggttaaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU925855 True 232 lncRNA 0.38 1 49811934 49812165

Neighbor

gene id symbol gene type direction distance location
LOC110533019 gss coding upstream 8472 49800763 ~ 49803462 (+)
gss gss coding upstream 14903 49788722 ~ 49797031 (+)
LOC110531195 trpc4ap coding upstream 61768 49745378 ~ 49785055 (+)
LOC118966066 trpc4ap coding upstream 68608 49741863 ~ 49743326 (+)
edem2 edem2 coding upstream 74478 49725707 ~ 49737456 (+)
LOC118966067 NA coding downstream 69991 49882156 ~ 49917857 (+)
si:dkey-8e10.3 LOC106572072 coding downstream 144676 49956841 ~ 49968731 (+)
LOC110532304 LOC106566492 coding downstream 373300 50138196 ~ 50205006 (+)
LOC110532305 LOC106572068 coding downstream 412679 50224844 ~ 50359369 (+)
fam217b LOC106572066 coding downstream 590399 50402564 ~ 50408370 (+)
G813822 NA non-coding upstream 71334 49729408 ~ 49740600 (+)
G813798 LOC105030512 non-coding upstream 121930 49657658 ~ 49690004 (+)
G813789 NA non-coding upstream 153343 49640220 ~ 49658591 (+)
G813769 NA non-coding upstream 209536 49601968 ~ 49602398 (+)
G814225 NA non-coding downstream 26873 49839038 ~ 49839290 (+)
G814281 NA non-coding downstream 66915 49879080 ~ 49879349 (+)
G814313 LOC106610265 non-coding downstream 129304 49941469 ~ 49941746 (+)
G814336 NA non-coding downstream 172261 49984426 ~ 49984958 (+)
G813139 NA other upstream 696316 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 805224 48962187 ~ 49006710 (+)
G813071 NA other upstream 851943 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 1241341 48545454 ~ 48570593 (+)
G812143 NA other upstream 1829633 47982001 ~ 47982301 (+)
G815428 NA other downstream 984049 50796214 ~ 50800381 (+)
G815610 NA other downstream 1266282 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 1533207 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 2511106 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 2914256 52692676 ~ 52734929 (+)

Expression


Co-expression Network