G814313 (LOC106610265)


Basic Information

Item Value
gene id G814313
gene name LOC106610265
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 49941469 ~ 49941746 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU926333
ATGTTATAGATTACAGCTTCCCCCTGATTACCGCATTAACCCCTAGTTCCATGTATCTCTCCTCAGGCTGGTGGTGGCTGGcccactccaggagtctgaggtgcgggaggttcctccgccccctctggacatcgagggggccccggcgtactctgttcgttccatactggattcgagaagtcgggcgaggggccttcagtacctcgtggactgggaggggtaaagtccagaggagagatgctgggttccggtggaggacgggTTGGATCCTTCTATGC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU926333 True 278 lncRNA 0.59 1 49941469 49941746

Neighbor

gene id symbol gene type direction distance location
LOC118966067 NA coding upstream 23612 49882156 ~ 49917857 (+)
LOC110533019 gss coding upstream 138007 49800763 ~ 49803462 (+)
gss gss coding upstream 144438 49788722 ~ 49797031 (+)
LOC110531195 trpc4ap coding upstream 191303 49745378 ~ 49785055 (+)
LOC118966066 trpc4ap coding upstream 198143 49741863 ~ 49743326 (+)
si:dkey-8e10.3 LOC106572072 coding downstream 15095 49956841 ~ 49968731 (+)
LOC110532304 LOC106566492 coding downstream 243719 50138196 ~ 50205006 (+)
LOC110532305 LOC106572068 coding downstream 283098 50224844 ~ 50359369 (+)
fam217b LOC106572066 coding downstream 460818 50402564 ~ 50408370 (+)
LOC118966068 NA coding downstream 481700 50423446 ~ 50428094 (+)
G814281 NA non-coding upstream 62120 49879080 ~ 49879349 (+)
G814225 NA non-coding upstream 102179 49839038 ~ 49839290 (+)
G813870 NA non-coding upstream 129304 49811934 ~ 49812165 (+)
G813822 NA non-coding upstream 200869 49729408 ~ 49740600 (+)
G814336 NA non-coding downstream 42680 49984426 ~ 49984958 (+)
G814483 NA non-coding downstream 252069 50193815 ~ 50198790 (+)
G814493 NA non-coding downstream 275598 50217344 ~ 50217613 (+)
G814494 NA non-coding downstream 277846 50219592 ~ 50219804 (+)
G813139 NA other upstream 825851 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 934759 48962187 ~ 49006710 (+)
G813071 NA other upstream 981478 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 1370876 48545454 ~ 48570593 (+)
G812143 NA other upstream 1959168 47982001 ~ 47982301 (+)
G815428 NA other downstream 854468 50796214 ~ 50800381 (+)
G815610 NA other downstream 1136701 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 1403626 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 2381525 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 2784675 52692676 ~ 52734929 (+)

Expression


Co-expression Network