Gene
RNA
| Item | Value |
|---|---|
| gene id | G814336 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 49984426 ~ 49984958 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| scavenger receptor cysteine-rich type 1 protein M130-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU926362 | True | 430 | lncRNA | 0.54 | 2 | 49984426 | 49984958 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-8e10.3 | LOC106572072 | coding | upstream | 15695 | 49956841 ~ 49968731 (+) |
| LOC118966067 | NA | coding | upstream | 66569 | 49882156 ~ 49917857 (+) |
| LOC110533019 | gss | coding | upstream | 180964 | 49800763 ~ 49803462 (+) |
| gss | gss | coding | upstream | 187395 | 49788722 ~ 49797031 (+) |
| LOC110531195 | trpc4ap | coding | upstream | 234260 | 49745378 ~ 49785055 (+) |
| LOC110532304 | LOC106566492 | coding | downstream | 200507 | 50138196 ~ 50205006 (+) |
| LOC110532305 | LOC106572068 | coding | downstream | 239886 | 50224844 ~ 50359369 (+) |
| fam217b | LOC106572066 | coding | downstream | 417606 | 50402564 ~ 50408370 (+) |
| LOC118966068 | NA | coding | downstream | 438488 | 50423446 ~ 50428094 (+) |
| si:dkey-178k16.1 | LOC106572064 | coding | downstream | 460594 | 50445552 ~ 50557497 (+) |
| G814313 | LOC106610265 | non-coding | upstream | 42680 | 49941469 ~ 49941746 (+) |
| G814281 | NA | non-coding | upstream | 105077 | 49879080 ~ 49879349 (+) |
| G814225 | NA | non-coding | upstream | 145136 | 49839038 ~ 49839290 (+) |
| G813870 | NA | non-coding | upstream | 172261 | 49811934 ~ 49812165 (+) |
| G814483 | NA | non-coding | downstream | 208857 | 50193815 ~ 50198790 (+) |
| G814493 | NA | non-coding | downstream | 232386 | 50217344 ~ 50217613 (+) |
| G814494 | NA | non-coding | downstream | 234634 | 50219592 ~ 50219804 (+) |
| G813139 | NA | other | upstream | 868808 | 49115137 ~ 49115618 (+) |
| G813074 | etbr2 | other | upstream | 977716 | 48962187 ~ 49006710 (+) |
| G813071 | NA | other | upstream | 1024435 | 48959749 ~ 48959991 (+) |
| G812688 | LOC106572106 | other | upstream | 1413833 | 48545454 ~ 48570593 (+) |
| G812143 | NA | other | upstream | 2002125 | 47982001 ~ 47982301 (+) |
| G815428 | NA | other | downstream | 811256 | 50796214 ~ 50800381 (+) |
| G815610 | NA | other | downstream | 1093489 | 51078447 ~ 51078942 (+) |
| G815767 | casz1 | other | downstream | 1360414 | 51345372 ~ 51346494 (+) |
| LOC110532349 | LOC106591969 | other | downstream | 2338313 | 52323001 ~ 52325924 (+) |
| LOC110532368 | LOC106572016 | other | downstream | 2741463 | 52692676 ~ 52734929 (+) |
