G814483


Basic Information

Item Value
gene id G814483
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 50193815 ~ 50198790 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU926524
gcttggtcggtagggatgtccttgtctcatcgcgcaccagcgactcctgtggcaggccgggcgcagtgcgcgctaaccaaggttgccaggtgcacgttggtgcggctggcttccgggttggatgcgcgcgacgcattactttcaaccttcgtctctcccgagcccgtacgggagttgtagcgatgagacaagatagtagctactaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU926524 True 206 lncRNA 0.60 2 50193815 50198790

Neighbor

gene id symbol gene type direction distance location
si:dkey-8e10.3 LOC106572072 coding upstream 225084 49956841 ~ 49968731 (+)
LOC118966067 NA coding upstream 275958 49882156 ~ 49917857 (+)
LOC110533019 gss coding upstream 390353 49800763 ~ 49803462 (+)
gss gss coding upstream 396784 49788722 ~ 49797031 (+)
LOC110531195 trpc4ap coding upstream 443649 49745378 ~ 49785055 (+)
LOC110532305 LOC106572068 coding downstream 26054 50224844 ~ 50359369 (+)
fam217b LOC106572066 coding downstream 203774 50402564 ~ 50408370 (+)
LOC118966068 NA coding downstream 224656 50423446 ~ 50428094 (+)
si:dkey-178k16.1 LOC106572064 coding downstream 246762 50445552 ~ 50557497 (+)
cntn3a.2 LOC106572060 coding downstream 766927 50965717 ~ 51041645 (+)
G814336 NA non-coding upstream 208857 49984426 ~ 49984958 (+)
G814313 LOC106610265 non-coding upstream 252069 49941469 ~ 49941746 (+)
G814281 NA non-coding upstream 314466 49879080 ~ 49879349 (+)
G814225 NA non-coding upstream 354525 49839038 ~ 49839290 (+)
G813870 NA non-coding upstream 381650 49811934 ~ 49812165 (+)
G814493 NA non-coding downstream 18554 50217344 ~ 50217613 (+)
G814494 NA non-coding downstream 20802 50219592 ~ 50219804 (+)
G814590 NA non-coding downstream 167008 50365798 ~ 50372376 (+)
G814594 NA non-coding downstream 174772 50373562 ~ 50373769 (+)
G813139 NA other upstream 1078197 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 1187105 48962187 ~ 49006710 (+)
G813071 NA other upstream 1233824 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 1623222 48545454 ~ 48570593 (+)
G812143 NA other upstream 2211514 47982001 ~ 47982301 (+)
G815428 NA other downstream 597424 50796214 ~ 50800381 (+)
G815610 NA other downstream 879657 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 1146582 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 2124481 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 2527631 52692676 ~ 52734929 (+)

Expression


Co-expression Network