G815043


Basic Information

Item Value
gene id G815043
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 50217123 ~ 50217772 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU927143
ccagactcttccagatctgccagtcgaccagactcttccagatctgccagtcgaccagactcttccagatctgccagtcgaccagactcttccagatctgccagtcgaccagactcttccagttctgccagtcgaccagactcttccagatctgccagtcgaccagactcttccagatctgccagtcgaccagactcttccagatctgccagtcgaccagactcttccagttctgccagtcgaccagactcttccagatctgccagtcgaccaggatctgccagtcagccaggatctgccgaaaccaccagccagccaggatctggtagattcatcatcctgcctgagcttcctctcactcctgagcttcctctcactcctgagcttcctctcactcctgagcttcccctcagtcccgagctgcctcagtcccgagctgcccctcagtcccgatctgctcctcagtccagtggggttctgggtgaggactactaggccatggtcggcggcgagggtggactatccagggacgcgaggagaagggactaagacattgattgagtggggtccacgtcccgcgccggagccgccaccatggacagacgcccacccggaccctccctattgttatgaggtgcgttcgggagtcc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106586928

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU927143 True 650 lncRNA 0.59 1 50217123 50217772

Neighbor

gene id symbol gene type direction distance location
LOC110532303 LOC106572070 coding downstream 36269 50138184 ~ 50180854 (-)
kcnd1 LOC106572071 coding downstream 144886 50000110 ~ 50072237 (-)
LOC110532301 NA coding downstream 231561 49982397 ~ 49985562 (-)
LOC110532299 LOC106572073 coding downstream 392330 49820974 ~ 49824793 (-)
LOC110531196 NA coding downstream 398366 49806132 ~ 49818757 (-)
pnck LOC106572314 coding upstream 162467 50380239 ~ 50401918 (-)
ppp1r3da LOC106572067 coding upstream 176561 50394333 ~ 50401913 (-)
ttll9 ttll9 coding upstream 193146 50410918 ~ 50421336 (-)
LOC118966203 NA coding upstream 300372 50518144 ~ 50518200 (-)
cntn3a.1 LOC106572063 coding upstream 345790 50563562 ~ 50666849 (-)
G815018 NA non-coding downstream 23567 50156143 ~ 50193556 (-)
G814870 NA non-coding downstream 290953 49925843 ~ 49926170 (-)
G814863 NA non-coding downstream 295737 49921144 ~ 49921386 (-)
G814862 NA non-coding downstream 297128 49919729 ~ 49919995 (-)
G815056 NA non-coding upstream 24695 50242467 ~ 50252211 (-)
G815142 NA non-coding upstream 137497 50355269 ~ 50359362 (-)
G815154 NA non-coding upstream 158340 50376112 ~ 50376464 (-)
G815174 NA non-coding upstream 209509 50427281 ~ 50428081 (-)
G815176 NA non-coding upstream 212778 50430550 ~ 50430800 (-)
G814157 edem2 other downstream 481012 49735145 ~ 49736111 (-)
G814020 NA other downstream 750361 49463957 ~ 49466762 (-)
G813357 LOC106578276 other downstream 1301419 48915435 ~ 48915704 (-)
G812840 NA other downstream 1708029 48508645 ~ 48509094 (-)
LOC110532252 fkb1a other downstream 1930693 48278174 ~ 48286453 (-)
G815044 NA other upstream 584 50218356 ~ 50218697 (-)
G815045 NA other upstream 1095 50218867 ~ 50219848 (-)
G817848 NA other upstream 1935510 52153282 ~ 52153642 (-)
LOC110532367 LOC106572017 other upstream 2445681 52663417 ~ 52668762 (-)
G818117 NA other upstream 2509395 52727167 ~ 52731623 (-)

Expression


Co-expression Network