G814494


Basic Information

Item Value
gene id G814494
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 50219592 ~ 50219804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU926538
ggaggtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtattttttgtgacgaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaacttggctgtgcaaaattattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU926538 True 213 lncRNA 0.37 1 50219592 50219804

Neighbor

gene id symbol gene type direction distance location
LOC110532304 LOC106566492 coding upstream 14586 50138196 ~ 50205006 (+)
si:dkey-8e10.3 LOC106572072 coding upstream 250861 49956841 ~ 49968731 (+)
LOC118966067 NA coding upstream 301735 49882156 ~ 49917857 (+)
LOC110533019 gss coding upstream 416130 49800763 ~ 49803462 (+)
gss gss coding upstream 422561 49788722 ~ 49797031 (+)
LOC110532305 LOC106572068 coding downstream 5040 50224844 ~ 50359369 (+)
fam217b LOC106572066 coding downstream 182760 50402564 ~ 50408370 (+)
LOC118966068 NA coding downstream 203642 50423446 ~ 50428094 (+)
si:dkey-178k16.1 LOC106572064 coding downstream 225748 50445552 ~ 50557497 (+)
cntn3a.2 LOC106572060 coding downstream 745913 50965717 ~ 51041645 (+)
G814493 NA non-coding upstream 1979 50217344 ~ 50217613 (+)
G814483 NA non-coding upstream 20802 50193815 ~ 50198790 (+)
G814336 NA non-coding upstream 234634 49984426 ~ 49984958 (+)
G814313 LOC106610265 non-coding upstream 277846 49941469 ~ 49941746 (+)
G814590 NA non-coding downstream 145994 50365798 ~ 50372376 (+)
G814594 NA non-coding downstream 153758 50373562 ~ 50373769 (+)
G814602 NA non-coding downstream 160220 50380024 ~ 50380236 (+)
G814621 NA non-coding downstream 202839 50422643 ~ 50422974 (+)
G813139 NA other upstream 1103974 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 1212882 48962187 ~ 49006710 (+)
G813071 NA other upstream 1259601 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 1648999 48545454 ~ 48570593 (+)
G812143 NA other upstream 2237291 47982001 ~ 47982301 (+)
G815428 NA other downstream 576410 50796214 ~ 50800381 (+)
G815610 NA other downstream 858643 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 1125568 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 2103467 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 2506617 52692676 ~ 52734929 (+)

Expression


Co-expression Network