G815142


Basic Information

Item Value
gene id G815142
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 50355269 ~ 50359362 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU927242
GGAATTTTTACTAAAACACTTGCCTTTATTTGAATTCAAACATTGTTCAGAGAAAATAATCATTGAGGATCATACACGAATAAAACATTCAAGAACATACAGCATCATCCACATATTTTAATTAGCAAAACAAAACACCATGCTTGTCATTTCAACATTAAGTTAGAATCCAATCTTTTAAAAACCTCTGACTGAGTAAAAAAAAGTGCAAATATATACAAAACACTTCATTGCAGCCAGCGTTTAAAGGACTCATTACTACAACTCCttcaaactaacaaaataaaatataaaaagaaataacaataatttaaaaggaaacattttaaacaaataattatacaaaatatatttatatatttatatagaatTAAGGACTAGGCAGAGCAATCATCCATTCGTCAGTCAGTCACAAAGCTACCTTCTCTCCAGACAAAGTTAATAAATTCCATATATCTTTGAAGCAGTAAAGAAATTTGTTACGTTAAATCGATTAAAACATTTGGGATAAACAGACAAAATCAACAAATAaattataatttatttatttgagacaAAAGTTTAACTTTTTtactagaacactgactgaaatGTAATTATGGATCTAAAACGGACATAGCTTCTACAGTATCTACTTAGAAACATCACAAGTTTGCACTCCCTCCTTTCTTCCTTACATGTTACAGGTGCTTTTTTTTATGTTGCTGTTTAAACAACATCGCAAAACCAGACGTACGGCCGCGGCTCTGAGTTCTACAGCCCAATCACCTGGCCCTTCACTAGTTTACATATGATGTATGTGTAACAGTGTGGATTCAGTCCCTCTCTTTGCCTCaatctgggctcgaaccagggaccctctgaacacattgGCAACTGCCTCCCAAGAAATAttgttacctatcgctccacaagaGCCAcgtcaaggtctcagagcgagtgacgtcaccgattgaaacgctactagcgcacgccgctaactagctagccatttcacaccggttacatatGGCAGGCAGCCAAACTACTTTGGATGATTTCACCCCCAAAAATGGATACCTTATTGCAGTTACTATTTGAATTGTTTACTTATGTGGGTAGATTGCAACCAGATTCAAACCCTATGAGATGGCGTTAACCAGAGGTACTAAGTCAAAATTCAAGACGTTCTCTTCCAGATTTATGATAAACTTTAATTTTGTAAAGTGGCTCAAGCAGAGCTTTGATATCTGTAATACACCTGCAATGCTGACAGAGCAGCTCTGGCAACCAGGCCGTCATTTCTGACTGAGTCATTTTCACATATGGTGGAAGGTGATATCCCCCCCAGAGCTAGATCCAGATACACTGACCCAATTTCTCTGCCCCAAAATAACACCAGGATGTTGAAACCCATTCTCCTTAATTATCCTCCTGCAGCTCTTAACATGCTAATGAGCTCCAGttttatttgaaaatgtatttctctCAGAGTTCCAAGACCAAATTCTAAATTGATTTGGTGGTTATCTACAATGTGCATCTTCCATGTAGAAaaatgggtctctctctctctctctctctcacttggtGTGGATTTAATGAAATGTGTGCAGGGTTATGAAAATATATAATAATGGCTCTTTTGTTCCTGGGCTGATAAGCAAGCCTAATTAGTCTACAGTAATGAGTTTGTTTCAGATCCATTTCGGTCAGATCTAAACAGAGCATAACCGTGTTAAAGGTCCCTATGAAAAACAACACACAGCCAGCGTCTAGAGGACTAACACCTGTACACTGATAGACCAAAGTATTGGTTTAATTTATTAACAATAAATTGTATTTCATCTTCGAGGAATTAATGGATAAAATAACTGTTAGTTATACTGAAATATTTATATTCAGGACCAGGATTACCACAAACCTCTGGCTTTAGTAGTACAAATACATATTTGTCAAACATTAGTTATGGGGAACATTGGAATTTGAGGCTTTATCCTATTAAACTAAAAATCTTTTAAAGGTATGTTTGTAGCTGAATTTTTAAACGTGGTGTAATCTATGGTTAACATATATTGTAATATGTGGGTCAACCCAAAGACAAGAGCGTGAtcatctgttctctgttctctgtgccTCCTTTGGTCAGTCTGCATTCCTCACTGTTGTCACCAAACAGTTGATGTGGCGACCAAAGATTTACTTTTCAGTTATGGATGTGAAGGAACTCTGTTATTTACTGAATCTATGATGTATCCTAAATGAACCCGGCCCTGTGTGGGAATTGGCATCAAAAAGACTCCCGCAGCAGTGTTGCAGACTCGGcctatagtacagtacagagcaCACCAACTGTGTTCAGGTGTACAGTCACTAAAACTGTACAAAACAAGAGTTCACATTCTTgtgtaaaatgtaaataaatatgaaataaataaagacaaaacaataaATACTTCATCATTGGATAGGGCCGAACTCAGAACCACATGTAAATGCACTCAAATAATATTGAGGTATAAGACCACCAGACTGCATTCCCTCCTAGTAGAGAAGTATGGAGAGGGAGCATAGGAGTGTGTACAGTAAGCCGCTGTACcaccactgaaacacacagagcttCTACTGTCTGTCATGGAGGGAGTCAACACAGAGCAATGGCATTTACCAGCTGATCAGAACCTACGAAACAGCCtactgctgctggctctctgggACCGTGGGGTAAACAGAATGAAGGATTAAGGTCTCCTGGGTTGGGAATCAGAATTCAACACAGTAACCTCTAGCATGGTAATGGAAACACGGGCAGCATAGAGGCATTTTCTCCATTTACTACTGCGAATGACCTACATAAGTGAACTCACAACCACACAGGTTGTATTTAGACCGCATTCTGTTTCtagaatttaaaaaaacaatgaaTACTGGTGTCCTTGGTGTTGCGTTACACATTTTGATCAAGCTGTCATTTGCAATACGGAAAAAATCTGGAACAGAAAGATTACTACACAGAATGATTATCGCAACATAGAGATACTCTAACATAACTATTGGTTTAATGTAATCTAATGAAACATGGCTTGCTGTTTTAGAACTAGACTTATTGCTCGTGACGGATCGATTAGATTTAGGATGCTTGATATGGGTAAAAATAGTTGTTTCCACGACAGCAGTGGCCCTGGGCTCTGGATGGGAATTCCTCAGATCCTGACAGATCAGATTCACAGTGGTGCAGACTGACACAGGGATCTAAGTATAATTAGCTGGACAGTTACAATAGGGGTGGAACGTCTACGAGGAGAGGGCTTCACTTCCTGCAACACAAAGGCAAGCTTTAAAACTCTGGACTCTGAGCTGAGCCTCACCATCAGCAAAGGTCCATTTGGCCCCAAATTttaagaacaaaaaaaaaaaaaaaaaaaaggaaaaaggcGCTTTGTCGCTATGGCATTTGAGAGACGGGGGGATGGCCCAGCCTCAGCCCAGCCCCAACACTCCCCTCAATTTGTCACTTAATTAGGCCTCTGGTGCTTCCAGAATTTGGTCTCTTTTGTCCATACACTGCCTCCTTCATCACACACTGGCATTGAATCTCCCACCCTAACACATCAAAACAGAGCCTCAAAGCTTTCCTTTGGGGCCAATAGGTTATGGTATCTTACAATACTTGTAGTAAAGCCCATACGTTTCTAGATAAAATCCAGTCCACACCTAAATGTTACTTTTCAGCACTTTGTACAAATATTATCCCAGACCAAAAGCTACTCATCCCATGGCACTAGCTTGGCAATTCAGAACAGTTCCCAAAGCAACTTACTGTATGCCTCTATTGGAATGTATCTCATATTATCCACAGTAGTCCTCTTCCATTAGATTAGGCAGTTACTAAAGAGTCTGTCATTGAAAAGGCCAGTGTGGAGAAAAAAATGACTCAGAATGTTTCACTGGCAATGGCAGGTAGAGGTTTGAGGGAGTGAGGATATTGGGCACAGAATCTGGTCAGTAGACATTGGGCTTAATGTGCTGTGCTGTGGTTCGTTGTGTTGATTGTCCAGTGTCTTATGTCTTCATTTTTACTAGCACAAGCTGCGTATGTTCCAACACAGGTCCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU927242 True 4094 lncRNA 0.39 1 50355269 50359362

Neighbor

gene id symbol gene type direction distance location
LOC110532303 LOC106572070 coding downstream 174415 50138184 ~ 50180854 (-)
kcnd1 LOC106572071 coding downstream 283032 50000110 ~ 50072237 (-)
LOC110532301 NA coding downstream 369707 49982397 ~ 49985562 (-)
LOC110532299 LOC106572073 coding downstream 530476 49820974 ~ 49824793 (-)
LOC110531196 NA coding downstream 536512 49806132 ~ 49818757 (-)
pnck LOC106572314 coding upstream 20877 50380239 ~ 50401918 (-)
ppp1r3da LOC106572067 coding upstream 34971 50394333 ~ 50401913 (-)
ttll9 ttll9 coding upstream 51556 50410918 ~ 50421336 (-)
LOC118966203 NA coding upstream 158782 50518144 ~ 50518200 (-)
cntn3a.1 LOC106572063 coding upstream 204200 50563562 ~ 50666849 (-)
G815056 NA non-coding downstream 103058 50242467 ~ 50252211 (-)
G815043 NA non-coding downstream 137497 50217123 ~ 50217772 (-)
G815018 NA non-coding downstream 161713 50156143 ~ 50193556 (-)
G814870 NA non-coding downstream 429099 49925843 ~ 49926170 (-)
G815154 NA non-coding upstream 16750 50376112 ~ 50376464 (-)
G815174 NA non-coding upstream 67919 50427281 ~ 50428081 (-)
G815176 NA non-coding upstream 71188 50430550 ~ 50430800 (-)
G815177 NA non-coding upstream 71772 50431134 ~ 50431348 (-)
G815179 NA non-coding upstream 74592 50433954 ~ 50434181 (-)
G815045 NA other downstream 135421 50218867 ~ 50219848 (-)
G815044 NA other downstream 136572 50218356 ~ 50218697 (-)
G814157 edem2 other downstream 619158 49735145 ~ 49736111 (-)
G814020 NA other downstream 888507 49463957 ~ 49466762 (-)
G813357 LOC106578276 other downstream 1439565 48915435 ~ 48915704 (-)
G817848 NA other upstream 1793920 52153282 ~ 52153642 (-)
LOC110532367 LOC106572017 other upstream 2304091 52663417 ~ 52668762 (-)
G818117 NA other upstream 2367805 52727167 ~ 52731623 (-)
LOC110531203 NA other upstream 3646185 54005547 ~ 54065096 (-)
cep104 cep104 other upstream 3925685 54247726 ~ 54294920 (-)

Expression


Co-expression Network