G814594


Basic Information

Item Value
gene id G814594
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 50373562 ~ 50373769 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU926641
GCTTTACAAGTATTCcctgaacatactgtatgtttctttGTGAATAGCAATTTCATCATGAAGATCTCTCCCATCACCTGCTGATCACCAGGTCTCTTAGCTAcagattgttacaccagataatgtgatttaacCAAAGATTTTTGATATACATTACTGGGCATTACAAGATAGGTACTGTTTGGTGAAGCACAAAGAATATTGgacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU926641 True 208 lncRNA 0.37 1 50373562 50373769

Neighbor

gene id symbol gene type direction distance location
LOC110532305 LOC106572068 coding upstream 14199 50224844 ~ 50359369 (+)
LOC110532304 LOC106566492 coding upstream 168556 50138196 ~ 50205006 (+)
si:dkey-8e10.3 LOC106572072 coding upstream 404831 49956841 ~ 49968731 (+)
LOC118966067 NA coding upstream 455705 49882156 ~ 49917857 (+)
LOC110533019 gss coding upstream 570100 49800763 ~ 49803462 (+)
fam217b LOC106572066 coding downstream 28795 50402564 ~ 50408370 (+)
LOC118966068 NA coding downstream 49677 50423446 ~ 50428094 (+)
si:dkey-178k16.1 LOC106572064 coding downstream 71783 50445552 ~ 50557497 (+)
cntn3a.2 LOC106572060 coding downstream 591948 50965717 ~ 51041645 (+)
exosc10 exosc10 coding downstream 670646 51044415 ~ 51056932 (+)
G814590 NA non-coding upstream 1186 50365798 ~ 50372376 (+)
G814494 NA non-coding upstream 153758 50219592 ~ 50219804 (+)
G814493 NA non-coding upstream 155949 50217344 ~ 50217613 (+)
G814602 NA non-coding downstream 6255 50380024 ~ 50380236 (+)
G814621 NA non-coding downstream 48874 50422643 ~ 50422974 (+)
G814624 NA non-coding downstream 58121 50431890 ~ 50432090 (+)
G814626 NA non-coding downstream 59793 50433562 ~ 50433778 (+)
G814628 NA non-coding downstream 60954 50434723 ~ 50434938 (+)
G813139 NA other upstream 1257944 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 1366852 48962187 ~ 49006710 (+)
G813071 NA other upstream 1413571 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 1802969 48545454 ~ 48570593 (+)
G812143 NA other upstream 2391261 47982001 ~ 47982301 (+)
G815428 NA other downstream 422445 50796214 ~ 50800381 (+)
G815610 NA other downstream 704678 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 971603 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 1949502 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 2352652 52692676 ~ 52734929 (+)

Expression


Co-expression Network