G814678


Basic Information

Item Value
gene id G814678
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 50490000 ~ 50493434 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU926758
AATGtatgtaagggcgttcgtctgtaggaggaagagaagcggaccaaagcgcagcgtggtggttattcatattttaataaatcactacacatgaacaaactaacgaaaacaagaaaagTGAGAACGCAAaccagtcctatcctgtgacgacaaacacagtgacaggaacaatcacccacaaacacacagtgaaacccaggctacctaagtatgattctcaatcagagacaactaatgacacctgcctctgattgagaaccatactaggccgaaaacatagaaatgccccaaaacatagaaaaacaaacatagactgcccacccaactcacgccctgaccatactaaataaatacaaaacaacagaaatagaggtcagaacgtgacaatgtattaaccttctactgcagtgggctaaatcagggtcacacaaagtgtttcttggtagtcttaaacaagtCTACCaagaaacaaaagtatacacctcacacacatggttatgggcttaaaaaaaggaAGACATGTACGATGTCAGAAATAGAGTTGAATtcgcatccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU926758 True 556 lncRNA 0.41 2 50490000 50493434

Neighbor

gene id symbol gene type direction distance location
LOC118966068 NA coding upstream 61906 50423446 ~ 50428094 (+)
fam217b LOC106572066 coding upstream 81630 50402564 ~ 50408370 (+)
LOC110532305 LOC106572068 coding upstream 130637 50224844 ~ 50359369 (+)
LOC110532304 LOC106566492 coding upstream 284994 50138196 ~ 50205006 (+)
si:dkey-8e10.3 LOC106572072 coding upstream 521269 49956841 ~ 49968731 (+)
cntn3a.2 LOC106572060 coding downstream 472283 50965717 ~ 51041645 (+)
exosc10 exosc10 coding downstream 550981 51044415 ~ 51056932 (+)
srm srm coding downstream 567638 51061072 ~ 51067904 (+)
cort LOC106572313 coding downstream 612893 51106327 ~ 51107746 (+)
LOC110531197 NA coding downstream 631701 51125135 ~ 51127512 (+)
G814631 NA non-coding upstream 52734 50437037 ~ 50437266 (+)
G814628 NA non-coding upstream 55062 50434723 ~ 50434938 (+)
G814626 NA non-coding upstream 56222 50433562 ~ 50433778 (+)
G814624 NA non-coding upstream 57910 50431890 ~ 50432090 (+)
G814621 NA non-coding upstream 67026 50422643 ~ 50422974 (+)
G815404 NA non-coding downstream 274550 50767984 ~ 50768212 (+)
G815407 NA non-coding downstream 279678 50773112 ~ 50773312 (+)
G815423 NA non-coding downstream 299305 50792739 ~ 50792971 (+)
G815426 NA non-coding downstream 301780 50795214 ~ 50795433 (+)
G815427 NA non-coding downstream 302241 50795675 ~ 50796164 (+)
G813139 NA other upstream 1374382 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 1483290 48962187 ~ 49006710 (+)
G813071 NA other upstream 1530009 48959749 ~ 48959991 (+)
G812688 LOC106572106 other upstream 1919407 48545454 ~ 48570593 (+)
G812143 NA other upstream 2507699 47982001 ~ 47982301 (+)
G815428 NA other downstream 302780 50796214 ~ 50800381 (+)
G815610 NA other downstream 585013 51078447 ~ 51078942 (+)
G815767 casz1 other downstream 851938 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 1829837 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 2232987 52692676 ~ 52734929 (+)

Expression


Co-expression Network