Gene
RNA
| Item | Value |
|---|---|
| gene id | G815526 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 50920866 ~ 50921079 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU927654 | True | 214 | lncRNA | 0.44 | 1 | 50920866 | 50921079 |
50,918,400
50,918,800
50,919,200
50,919,600
50,920,000
50,920,400
50,920,800
50,921,200
50,921,600
50,922,000
50,922,400
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-178k16.1 | LOC106572064 | coding | upstream | 363369 | 50445552 ~ 50557497 (+) |
| LOC118966068 | NA | coding | upstream | 492772 | 50423446 ~ 50428094 (+) |
| fam217b | LOC106572066 | coding | upstream | 512496 | 50402564 ~ 50408370 (+) |
| LOC110532305 | LOC106572068 | coding | upstream | 561503 | 50224844 ~ 50359369 (+) |
| LOC110532304 | LOC106566492 | coding | upstream | 715860 | 50138196 ~ 50205006 (+) |
| cntn3a.2 | LOC106572060 | coding | downstream | 44638 | 50965717 ~ 51041645 (+) |
| exosc10 | exosc10 | coding | downstream | 123336 | 51044415 ~ 51056932 (+) |
| srm | srm | coding | downstream | 139993 | 51061072 ~ 51067904 (+) |
| cort | LOC106572313 | coding | downstream | 185248 | 51106327 ~ 51107746 (+) |
| LOC110531197 | NA | coding | downstream | 204056 | 51125135 ~ 51127512 (+) |
| G815517 | NA | non-coding | upstream | 6712 | 50913924 ~ 50914154 (+) |
| G815516 | NA | non-coding | upstream | 8312 | 50912344 ~ 50912554 (+) |
| G815509 | NA | non-coding | upstream | 20219 | 50900177 ~ 50900647 (+) |
| G815427 | NA | non-coding | upstream | 124702 | 50795675 ~ 50796164 (+) |
| G815426 | NA | non-coding | upstream | 125433 | 50795214 ~ 50795433 (+) |
| G815528 | NA | non-coding | downstream | 1696 | 50922775 ~ 50923001 (+) |
| G815536 | NA | non-coding | downstream | 16929 | 50938008 ~ 50938217 (+) |
| G815543 | NA | non-coding | downstream | 24333 | 50945412 ~ 50945755 (+) |
| G815552 | NA | non-coding | downstream | 32674 | 50953753 ~ 50954424 (+) |
| G815561 | NA | non-coding | downstream | 86279 | 51007358 ~ 51069498 (+) |
| G815428 | NA | other | upstream | 120485 | 50796214 ~ 50800381 (+) |
| G813139 | NA | other | upstream | 1805248 | 49115137 ~ 49115618 (+) |
| G813074 | etbr2 | other | upstream | 1914156 | 48962187 ~ 49006710 (+) |
| G813071 | NA | other | upstream | 1960875 | 48959749 ~ 48959991 (+) |
| G812688 | LOC106572106 | other | upstream | 2350273 | 48545454 ~ 48570593 (+) |
| G815610 | NA | other | downstream | 157368 | 51078447 ~ 51078942 (+) |
| G815767 | casz1 | other | downstream | 424293 | 51345372 ~ 51346494 (+) |
| LOC110532349 | LOC106591969 | other | downstream | 1402192 | 52323001 ~ 52325924 (+) |
| LOC110532368 | LOC106572016 | other | downstream | 1805342 | 52692676 ~ 52734929 (+) |
| G819897 | NA | other | downstream | 3805792 | 54726871 ~ 54727376 (+) |
