XLOC_027180 (BX119963.3)


Basic Information

Item Value
gene id XLOC_027180
gene name BX119963.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 12979653 ~ 12998711 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053563
ATAAATGTTATTGGGTCATTTTTAtttttttttttttttaatAATGATGTGCTGGAACTCATATTTGACTATTCAAGTTGCAGCCTTCATTGtggaatgctgtactttgatagccattggctgctaatgagaacgtctgaatTACATCTCatagaaataataaatatttatatagatataaaaTCATtttttttgtttgttttgttattaaaaagtGTGAAGACtcat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110543

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053563 True 228 mRNA 0.26 11 12979653 12998711

Neighbor

gene id symbol gene type direction distance location
XLOC_027178 vhll coding upstream 11632 12966640 ~ 12968021 (+)
XLOC_027177 wif1 coding upstream 22935 12931763 ~ 12956718 (+)
XLOC_027176 NA coding upstream 160276 12813200 ~ 12819377 (+)
XLOC_027175 NA coding upstream 224451 12752554 ~ 12755202 (+)
XLOC_027174 AL954848.1 coding upstream 255249 12702440 ~ 12724404 (+)
XLOC_027183 NA coding downstream 179447 13178158 ~ 13197865 (+)
XLOC_027184 BX470116.1 coding downstream 272081 13270792 ~ 13274635 (+)
XLOC_027185 cand1 coding downstream 413319 13412030 ~ 13425447 (+)
XLOC_027186 si:dkey-39a18.1 coding downstream 430282 13428993 ~ 13434027 (+)
XLOC_027187 dyrk2 coding downstream 451064 13449775 ~ 13462784 (+)
XLOC_027166 NA non-coding upstream 914290 12063991 ~ 12065363 (+)
XLOC_027165 NA non-coding upstream 926983 12039649 ~ 12052670 (+)
XLOC_027162 NA non-coding upstream 1028727 11946875 ~ 11950926 (+)
XLOC_027188 NA non-coding downstream 469880 13468591 ~ 13469897 (+)
XLOC_027189 NA non-coding downstream 490971 13489682 ~ 13493356 (+)
XLOC_027191 NA non-coding downstream 585343 13584054 ~ 13586183 (+)

Expression


Co-expression Network