XLOC_027181



Basic Information


Item Value
gene id XLOC_027181
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 12980696 ~ 12985047 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00057653
CAGACAGACAATTCTGCTTGAAGATTGATACACTTGATGACCACAAGAGGGACCCTGCAGATACAATGAGTGAtagaatgtttgtttatttatttaattagaaaaatgttAATCACTAAACACATTCAGTAATATACATGAAGGCCTGTTGACGCTAGATATTTAATGAAATTCAATAAATTTCTGGAAGTCATTTTCAGTCTGTCCTGTAGAAAGTGTGCAGTTCTCCATCCGCTCCGCTAGAGGTGCAAAAGACCTCACGTTTAGCACGAGGCTCAACTTTGgctctgtaaacaacacaacacttGACCACAGTCAAAACAAACCTTTCTGACCGTTTTAAAGATATAAAAGTAAATTTCCTGCAGGTGACAGTCAGTGagagtctttaaatgtcacttatcaGCACACATTTGAGCCATTCAGGCAAAAACATGCGACCATCTCCGGATGAAGTGCAGGAATGCTGGACACTCCAACACCCattcctttacaacttaaaaaggcatctttggagatctttcttttctttggacaTGAAGTAAGGCACTGCACTGTTCAGCTCTACAGCATGCTGGATGTTGCTTTATAAGaggtt

Function


GO:

id name namespace
GO:0022402 cell cycle process biological_process
GO:0010457 centriole-centriole cohesion biological_process
GO:0007049 cell cycle biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00057653 True 598 lncRNA 0.39 2 12980696 12985047

Neighbor


gene id symbol gene type direction distance location
XLOC_027179 NA coding upstream 371 12979512 ~ 12980325 (+)
XLOC_027178 vhll coding upstream 12675 12966640 ~ 12968021 (+)
XLOC_027177 wif1 coding upstream 23978 12931763 ~ 12956718 (+)
XLOC_027176 NA coding upstream 161319 12813200 ~ 12819377 (+)
XLOC_027175 NA coding upstream 225494 12752554 ~ 12755202 (+)
XLOC_027182 NA coding downstream 12073 12997120 ~ 13024021 (+)
XLOC_027183 NA coding downstream 193111 13178158 ~ 13197865 (+)
XLOC_027184 BX470116.1 coding downstream 285745 13270792 ~ 13274635 (+)
XLOC_027185 cand1 coding downstream 426983 13412030 ~ 13425447 (+)
XLOC_027186 si:dkey-39a18.1 coding downstream 443946 13428993 ~ 13434027 (+)
XLOC_027166 NA non-coding upstream 915333 12063991 ~ 12065363 (+)
XLOC_027165 NA non-coding upstream 928026 12039649 ~ 12052670 (+)
XLOC_027188 NA non-coding downstream 483544 13468591 ~ 13469897 (+)
XLOC_027189 NA non-coding downstream 504635 13489682 ~ 13493356 (+)

Expression



Co-expression Network