G816427


Basic Information

Item Value
gene id G816427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 51599976 ~ 51600326 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU928580
aTTGTGTTTAGGTTATTTTCATGCTCAAAGGTGATTTTGTCTCCcactgtctgttggaaagcagactgaacaaactttgactggtactgtatatcatcttgaaaatctatggcatgacttgaaaatggttgtctagcaattatcaacaatcaacttgacagagcttgaagaattttcaaAATAattatgggcaaatattgtacaatccaggtgtgcaaagctcttagatttACCCCcaaaaaactcacagctgtaatcgctgccaaatgtgcttctacgAAGTAttgggggtgtgaatacttatataaatgagatatttctgtatttacttttcaataaatgtgcaaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU928580 True 351 lncRNA 0.34 1 51599976 51600326

Neighbor

gene id symbol gene type direction distance location
pex14 pex14 coding upstream 280594 51202733 ~ 51319382 (+)
masp2 masp2 coding upstream 418242 51173762 ~ 51181734 (+)
LOC110531197 NA coding upstream 472464 51125135 ~ 51127512 (+)
cort LOC106572313 coding upstream 492230 51106327 ~ 51107746 (+)
srm srm coding upstream 532072 51061072 ~ 51067904 (+)
tardbpl tardbp coding downstream 105540 51705866 ~ 51710352 (+)
lzic lzic coding downstream 320820 51921146 ~ 51924442 (+)
LOC110532337 LOC106572044 coding downstream 573684 52174010 ~ 52176441 (+)
LOC110532339 LOC107599000 coding downstream 581902 52182228 ~ 52189437 (+)
si:dkey-6n6.1 LOC106572038 coding downstream 606900 52207226 ~ 52216054 (+)
G816426 NA non-coding upstream 183 51599459 ~ 51599793 (+)
G815768 casz1 non-coding upstream 249773 51348231 ~ 51350203 (+)
G815696 NA non-coding upstream 266882 51331995 ~ 51333094 (+)
G815697 NA non-coding upstream 268548 51330847 ~ 51331428 (+)
G815695 NA non-coding upstream 273724 51325904 ~ 51326252 (+)
G816504 NA non-coding downstream 97837 51698163 ~ 51698389 (+)
G816505 NA non-coding downstream 100373 51700699 ~ 51700970 (+)
G816478 pgd non-coding downstream 127445 51727771 ~ 51737134 (+)
G816519 NA non-coding downstream 145411 51745737 ~ 51746013 (+)
G816521 NA non-coding downstream 147154 51747480 ~ 51747703 (+)
G815767 casz1 other upstream 253482 51345372 ~ 51346494 (+)
G815610 NA other upstream 521034 51078447 ~ 51078942 (+)
G815428 NA other upstream 799595 50796214 ~ 50800381 (+)
G813139 NA other upstream 2484358 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 2593266 48962187 ~ 49006710 (+)
LOC110532349 LOC106591969 other downstream 722945 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 1126095 52692676 ~ 52734929 (+)
G819897 NA other downstream 3126545 54726871 ~ 54727376 (+)
G820665 NA other downstream 3632932 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 3930711 55531033 ~ 55647541 (+)

Expression


Co-expression Network