G816624


Basic Information

Item Value
gene id G816624
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 51906325 ~ 51906646 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU928791
ggttatacccacgtgggtgattgaaagatgaactgtgttgcggttgtcgtggtaatactatgaacgtttagatgccaatcaccatataagttcaacaTGAAAaagtctggaaggaggagagatgactagaaacgattctgttgaccgttttatgtgtggattaattgtcagagtagagtaccttgtgcatttcaggtaaaataacaacctaatgtttatatcccaggacaaattagctagcaacagcaagctagctaaataggacaaattagctagcaagtgcaagctaactagcttaattgccataaatgtttaatgcttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU928791 True 322 lncRNA 0.38 1 51906325 51906646

Neighbor

gene id symbol gene type direction distance location
tardbpl tardbp coding upstream 195973 51705866 ~ 51710352 (+)
pex14 pex14 coding upstream 586943 51202733 ~ 51319382 (+)
masp2 masp2 coding upstream 724591 51173762 ~ 51181734 (+)
LOC110531197 NA coding upstream 778813 51125135 ~ 51127512 (+)
cort LOC106572313 coding upstream 798579 51106327 ~ 51107746 (+)
lzic lzic coding downstream 14500 51921146 ~ 51924442 (+)
LOC110532337 LOC106572044 coding downstream 267364 52174010 ~ 52176441 (+)
LOC110532339 LOC107599000 coding downstream 275582 52182228 ~ 52189437 (+)
si:dkey-6n6.1 LOC106572038 coding downstream 300580 52207226 ~ 52216054 (+)
LOC110531199 LOC106572039 coding downstream 314191 52220837 ~ 52224935 (+)
G816602 NA non-coding upstream 38329 51867459 ~ 51867996 (+)
G816600 NA non-coding upstream 49037 51855605 ~ 51857288 (+)
G816522 NA non-coding upstream 157848 51748057 ~ 51748477 (+)
G816521 NA non-coding upstream 158622 51747480 ~ 51747703 (+)
G816519 NA non-coding upstream 160312 51745737 ~ 51746013 (+)
G816646 clstn1 non-coding downstream 46199 51952845 ~ 51990544 (+)
G816663 NA non-coding downstream 60914 51967560 ~ 51979205 (+)
G816645 ctnnbip1 non-coding downstream 111297 52017943 ~ 52050502 (+)
G816733 NA non-coding downstream 208581 52115227 ~ 52115437 (+)
G816737 NA non-coding downstream 211590 52118236 ~ 52118440 (+)
G815767 casz1 other upstream 559831 51345372 ~ 51346494 (+)
G815610 NA other upstream 827383 51078447 ~ 51078942 (+)
G815428 NA other upstream 1105944 50796214 ~ 50800381 (+)
G813139 NA other upstream 2790707 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 2899615 48962187 ~ 49006710 (+)
LOC110532349 LOC106591969 other downstream 416625 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 819775 52692676 ~ 52734929 (+)
G819897 NA other downstream 2820225 54726871 ~ 54727376 (+)
G820665 NA other downstream 3326612 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 3624391 55531033 ~ 55647541 (+)

Expression


Co-expression Network