G816733



Basic Information


Item Value
gene id G816733
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 52115227 ~ 52115437 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU928909
acacTGTTCTTGATAAACTCTTCACACTCTTGTTGTTGGAGAGAATTTTGCAGGTtgaaagcttatttcctgcaattctacacattttgtcatggggtgcaaagaaaatgttgcaatttgtaattctatacattttgccatgtctaatgtgtattcatgtgatatttgagtgactaaaAAATTACAACAATATCTATGGGCTAAATAAAAA

Function


NR:

description
PREDICTED: cyclic nucleotide-binding domain-containing protein 2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU928909 True 211 lncRNA 0.32 1 52115227 52115437

Neighbor


gene id symbol gene type direction distance location
lzic lzic coding upstream 190785 51921146 ~ 51924442 (+)
tardbpl tardbp coding upstream 404875 51705866 ~ 51710352 (+)
pex14 pex14 coding upstream 795845 51202733 ~ 51319382 (+)
masp2 masp2 coding upstream 933493 51173762 ~ 51181734 (+)
LOC110531197 NA coding upstream 987715 51125135 ~ 51127512 (+)
LOC110532337 LOC106572044 coding downstream 58573 52174010 ~ 52176441 (+)
LOC110532339 LOC107599000 coding downstream 66791 52182228 ~ 52189437 (+)
si:dkey-6n6.1 LOC106572038 coding downstream 91789 52207226 ~ 52216054 (+)
LOC110531199 LOC106572039 coding downstream 105400 52220837 ~ 52224935 (+)
dedd LOC106572035 coding downstream 114317 52229754 ~ 52234943 (+)
G816645 ctnnbip1 non-coding upstream 64725 52017943 ~ 52050502 (+)
G816646 clstn1 non-coding upstream 124683 51952845 ~ 51990544 (+)
G816663 NA non-coding upstream 136022 51967560 ~ 51979205 (+)
G816624 NA non-coding upstream 208581 51906325 ~ 51906646 (+)
G816602 NA non-coding upstream 247231 51867459 ~ 51867996 (+)
G816737 NA non-coding downstream 2799 52118236 ~ 52118440 (+)
G816740 NA non-coding downstream 9106 52124543 ~ 52124744 (+)
G816741 NA non-coding downstream 9941 52125378 ~ 52125719 (+)
G816742 tmem201 non-coding downstream 10363 52125800 ~ 52126017 (+)
G816744 NA non-coding downstream 12818 52128255 ~ 52132438 (+)
G815767 casz1 other upstream 768733 51345372 ~ 51346494 (+)
G815610 NA other upstream 1036285 51078447 ~ 51078942 (+)
G815428 NA other upstream 1314846 50796214 ~ 50800381 (+)
G813139 NA other upstream 2999609 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 3108517 48962187 ~ 49006710 (+)
LOC110532349 LOC106591969 other downstream 207834 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 610984 52692676 ~ 52734929 (+)
G819897 NA other downstream 2611434 54726871 ~ 54727376 (+)
G820665 NA other downstream 3117821 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 3415600 55531033 ~ 55647541 (+)

Expression



Co-expression Network