G816737


Basic Information

Item Value
gene id G816737
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 52118236 ~ 52118440 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU928913
actctatgtgCATATCAAAGTTCCAGAGTGGGATCTCTGCTAGTTTTAAAGTTATGGCCCATTTAACATATAGAAATTGGCATAGTAGGCAatgtaaccaatcacagccctgcAAATCAaggcgaccattttgaatccattttcacatCCACTCCGTTTTAAATGCTTACAAATTGGATCAAAATTCTAAAAGTAGCAGAGATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU928913 True 205 lncRNA 0.38 1 52118236 52118440

Neighbor

gene id symbol gene type direction distance location
lzic lzic coding upstream 193794 51921146 ~ 51924442 (+)
tardbpl tardbp coding upstream 407884 51705866 ~ 51710352 (+)
pex14 pex14 coding upstream 798854 51202733 ~ 51319382 (+)
masp2 masp2 coding upstream 936502 51173762 ~ 51181734 (+)
LOC110531197 NA coding upstream 990724 51125135 ~ 51127512 (+)
LOC110532337 LOC106572044 coding downstream 55570 52174010 ~ 52176441 (+)
LOC110532339 LOC107599000 coding downstream 63788 52182228 ~ 52189437 (+)
si:dkey-6n6.1 LOC106572038 coding downstream 88786 52207226 ~ 52216054 (+)
LOC110531199 LOC106572039 coding downstream 102397 52220837 ~ 52224935 (+)
dedd LOC106572035 coding downstream 111314 52229754 ~ 52234943 (+)
G816733 NA non-coding upstream 2799 52115227 ~ 52115437 (+)
G816645 ctnnbip1 non-coding upstream 67734 52017943 ~ 52050502 (+)
G816646 clstn1 non-coding upstream 127692 51952845 ~ 51990544 (+)
G816663 NA non-coding upstream 139031 51967560 ~ 51979205 (+)
G816624 NA non-coding upstream 211590 51906325 ~ 51906646 (+)
G816740 NA non-coding downstream 6103 52124543 ~ 52124744 (+)
G816741 NA non-coding downstream 6938 52125378 ~ 52125719 (+)
G816742 tmem201 non-coding downstream 7360 52125800 ~ 52126017 (+)
G816744 NA non-coding downstream 9815 52128255 ~ 52132438 (+)
G816745 tmem201 non-coding downstream 14231 52132671 ~ 52133015 (+)
G815767 casz1 other upstream 771742 51345372 ~ 51346494 (+)
G815610 NA other upstream 1039294 51078447 ~ 51078942 (+)
G815428 NA other upstream 1317855 50796214 ~ 50800381 (+)
G813139 NA other upstream 3002618 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 3111526 48962187 ~ 49006710 (+)
LOC110532349 LOC106591969 other downstream 204831 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 607981 52692676 ~ 52734929 (+)
G819897 NA other downstream 2608431 54726871 ~ 54727376 (+)
G820665 NA other downstream 3114818 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 3412597 55531033 ~ 55647541 (+)

Expression


Co-expression Network