G816957


Basic Information

Item Value
gene id G816957
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 52541601 ~ 52541824 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU929163
gctactctctgttattatctatgcatagtcactttaataactctacctacatgtacatactacctcaattacctcgattaaccggtgcccccacacattgactctgtacaggtaccccctgtatatagtctcgctattattttttacttctgctctttaattacttgttccttttatttcttattcttatttgtgttttttaaactgcattgttggttaggggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU929163 True 224 lncRNA 0.36 1 52541601 52541824

Neighbor

gene id symbol gene type direction distance location
htr6 LOC106572282 coding upstream 27138 52513511 ~ 52514463 (+)
LOC118936401 LOC106566850 coding upstream 37007 52502997 ~ 52504594 (+)
sike1 sike1 coding upstream 53368 52485523 ~ 52488233 (+)
LOC110532349 LOC106591969 coding upstream 215677 52323001 ~ 52325924 (+)
LOC110532344 LOC106572032 coding upstream 246745 52260178 ~ 52294856 (+)
vwa1 LOC106572023 coding downstream 8303 52550127 ~ 52567525 (+)
LOC110532365 LOC106572021 coding downstream 64619 52606443 ~ 52621080 (+)
LOC110532366 NA coding downstream 117850 52659674 ~ 52663309 (+)
LOC110531201 NA coding downstream 139687 52681511 ~ 52684202 (+)
LOC110532368 LOC106572016 coding downstream 150852 52692676 ~ 52734929 (+)
G816956 NA non-coding upstream 1162 52540069 ~ 52540439 (+)
G816951 NA non-coding upstream 12355 52528408 ~ 52529246 (+)
G816941 NA non-coding upstream 35089 52506294 ~ 52506512 (+)
G816940 NA non-coding upstream 35314 52505992 ~ 52506287 (+)
G816934 NA non-coding upstream 46791 52494545 ~ 52494810 (+)
G816962 NA non-coding downstream 3138 52544962 ~ 52545180 (+)
G816972 NA non-coding downstream 27239 52569063 ~ 52570146 (+)
G816969 NA non-coding downstream 29110 52570934 ~ 52572824 (+)
G816981 NA non-coding downstream 46609 52588433 ~ 52588713 (+)
G816985 NA non-coding downstream 50226 52592050 ~ 52592363 (+)
G815767 casz1 other upstream 1195107 51345372 ~ 51346494 (+)
G815610 NA other upstream 1462659 51078447 ~ 51078942 (+)
G815428 NA other upstream 1741220 50796214 ~ 50800381 (+)
G813139 NA other upstream 3425983 49115137 ~ 49115618 (+)
G819897 NA other downstream 2185047 54726871 ~ 54727376 (+)
G820665 NA other downstream 2691434 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 2989213 55531033 ~ 55647541 (+)
G820944 NA other downstream 3155816 55697640 ~ 55697978 (+)

Expression


Co-expression Network