G817222


Basic Information

Item Value
gene id G817222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 53039515 ~ 53040495 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU929449
agcttaatattgcggaaagaatgttgcttccatcaatgtaattgtctgcatcatttccagtcCCCCATACATTttttgggtaaatatatatatccatacacggattcacacatatatacatacacatacctatatagacatatataaattaatttccttaggcattaatcatgcaaaatGTAATTTTTTATTGTGATGcggcatcagtgagattcaaacctataatATTCCATTCTCTATCCagggaattagtccactgcaacCACCAGGATGCACGCTATGTTTATGCAATATTGGAGATAGTTTGGTGAGATCTGACatgccccctgagcccactctTGACACCTATCCCAAATGGGAACTACACATGTGGCTCATGCGCGCAGTGCAATAGCACTATAAAAACGTCTttcttcagacacccacatacaggtCGAAAGATCCATGTTAGGGGTATCATCTCATGCAAGACCAAGGGAGTAATCTATCTCATCAACTGTTCATGTGGAAAAGCCTATGTAGGACAAAtaaaaagacaattaaaacaacACATAGCTGAACACCGCAGCTCAATCAGGGGTAAGAATATTGACTatccagtagcagctcactttgttgaagctaaccatcccatctcctctctcaaatacacaggcattgagcatgttgctctaccaaggagaggaggtaacatcgagatcctactactacaaagggaggcttactggatatcctatctaaaaacattgacccctagtggtctgaatattgactttgatctctGGCCCTTCTTATGAACACATTTTCCTTTATGAACAAGTCTTACAATGTATTCATTTTTTTACAGCTTATTAGCGTACAGTACACCTAATATGTTCCCTGTGTTGATGATGTTCATTATATATTAaggttgaaccaaaagattacatgtaacaaaAATGAAATACGAAATTATGTGAAATTGAAAGAAAcaatgtatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU929449 True 981 lncRNA 0.38 1 53039515 53040495

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-36 NA coding upstream 45577 52993863 ~ 52993938 (+)
LOC110532377 LOC106572006 coding upstream 49314 52957040 ~ 52990201 (+)
ano11 LOC106572008 coding upstream 82563 52924399 ~ 52956952 (+)
LOC110532374 LOC106572009 coding upstream 126988 52859616 ~ 52912527 (+)
LOC110532373 LOC106572011 coding upstream 180264 52854835 ~ 52859251 (+)
LOC110532379 LOC106572005 coding downstream 2582 53043077 ~ 53121864 (+)
LOC110532383 LOC106572002 coding downstream 87943 53128438 ~ 53154128 (+)
LOC110532385 LOC106572000 coding downstream 162486 53202981 ~ 53214762 (+)
LOC110532390 gbrd coding downstream 364410 53404905 ~ 53425693 (+)
LOC110532391 LOC106571996 coding downstream 555588 53596083 ~ 53676213 (+)
G817221 NA non-coding upstream 1041 53038129 ~ 53038474 (+)
G817215 NA non-coding upstream 6157 53033139 ~ 53033358 (+)
LOC110532366 NA non-coding upstream 378469 52659674 ~ 52663309 (+)
G817021 NA non-coding upstream 384589 52654659 ~ 52654926 (+)
G817016 NA non-coding upstream 392359 52646934 ~ 52647156 (+)
G817307 NA non-coding downstream 214816 53255311 ~ 53256967 (+)
G817278 NA non-coding downstream 227445 53267940 ~ 53268576 (+)
G817374 NA non-coding downstream 353414 53393909 ~ 53426571 (+)
G818719 NA non-coding downstream 651778 53692273 ~ 53692710 (+)
LOC110532368 LOC106572016 other upstream 311995 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 713875 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 1693021 51345372 ~ 51346494 (+)
G815610 NA other upstream 1960573 51078447 ~ 51078942 (+)
G815428 NA other upstream 2239134 50796214 ~ 50800381 (+)
G819897 NA other downstream 1686376 54726871 ~ 54727376 (+)
G820665 NA other downstream 2192763 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 2490542 55531033 ~ 55647541 (+)
G820944 NA other downstream 2657145 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 2933547 55974042 ~ 55975316 (+)

Expression


Co-expression Network