XLOC_027192 (tnpo3)


Basic Information

Item Value
gene id XLOC_027192
gene name tnpo3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 13586455 ~ 13605158 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053580
CTCCGTCACCGTTTCATGGGAATGACCCTCAGTGGGTGTGTCTCCAACGAAATTATTCCCAAAAATATATACCTCGCATTACACTGAACTCACAAACCGCAAAACACATTTAACTCTTagaaagttattttttaaatgttgacatATTTCTGCGAGTTGTCCGAATGTCGCGCTATTAACATAAAACCGCTGTGGTCCGGACTCATTATAGTTCCCGTGCCGTAGTTTCCACACGGACTTGTTTGACAGGAACGCCCTGTGTCTTGCTTGAGATGGCGGCCAGATCGGAGAACGCGAGGGCCGAATAAATAGTCAACCTGCGCGTCAGTAACCTCCCGAGAAGCGCAAGCAGTGTCATTTACCCCATATCTACACCCTCTAGAAGCAGAAGAGCACCATGGAAGGCGGGAAACCCACCCTGCCGCTGGTTTACCAGGCCGTGCAGGCGCTGTATCACGACCCGGACCCTGCCGGCAAGGAGCGCGCCTCGGTCTGGCTAGGAGAGCTGCAGAGATCGATGTACGCGTGGGAAATCTCCGATCAGCTCCTGCAGCTGAAACAGGACATCGAGTCTTGTTACTTCGCAGCCCAGACGATGAAGATGAAGATCCAGACGTCGTTCTACGAGCTTCCCCCAGATTCTCACACTGCACTGAGAGATTCACTCTTATCTCACATCCAGAACCTCAAAGACCTTTCTCCCATCATCGTCACACAGCTCGCATTGGCAATCGCAGATCTGGCTCTTCAGATGGCCTCGTGGAAAGGCTGCGTTCACACCCTCATAGAAAAATACAGTAACGATGTATCCTCCATGACTTTCCTGATTGAGATACTCACAGTGCTGCCGGAGGAGGTACATAGTCGCTCTCTGAGGATTGGAGCCAACAGACGGACAGAGATTATTGAGGATCTGGCCTATTACTCTACCACAGTGGTCACTCTTCTGGTGACGTGTGCGGAGAAGTCTGGCCACGACGAGAAGATGCTCATCAAGGTGTTCCGATGTTTGGGGAGCTGGTTTAATTTAGGAGTGCTGGACAACAATTTCATGGCAAACAATCAACTGCTGATGATTCTCTTCCAAGTGCTGCAGAGGGATGAGACGTCTACAAACCTGCATGAGGCAGCATCAGACTGCGTATGCTCAGCATTGTATGCAATCGAGAATGTGGCCATTCACCTGCCGCTGGCCATGCAGCTCTTCCAGGGAGTCCTTACTTTAGAAACAGCCTACCACATGGCCGTGGCCCGAGAAGACCTCGACAAGGTGCTAAATTATTGCCGAATCTTTACTGAATTGTGCGAGACGTTTTTGGAGATGACGGTAAGGACACCAGGACAGGGCATGGGAGATCTGCGCACACTAGAGTTGCTGCTTATTTGTGCAGGACATCCCCAGTATGAGGTGGTTGAGATCTCGTTTAACTTCTGGTACCGTCTGGGAGAGCATCTTTATAAAATCAACGATCCGGCACTCCATAATGTTTTTAGGCCATACATTCAGAGATTACTGCACAGTCTTGCCCGCCACTGCCAACTCGACCCAGATCACGAAGGAGTTCCAGAGGACACCGATGATTTTGGAGAGTTTAGGATGAGAGTATCTGATCTTGTTAAAGATGTGATTTTCTTAGTTGGCTCTATGGAGTGCTTTGCACAGCTGTATTCAACTTTGAGGGAGGGAAACCCCCCATGGGAAGTAACTGAGGCTGTTCTGTTCATCATGGCTTCCATCGCTAAGAATGTTGATCCTGAGAATAATCCCACCTTAATGGAGGTGCTGGAGCAAATAGTGTTGCTTCCTGAGACGGTTCACCTTGCCGTTCGCTACACCAGTATTGAGCTGGTCGGAGAGATGAGCGAAGTGATCGACCGCAACCCTTCCATGTTAGATACTGTTTTGAACTTCCTGATGAAGGGTTTACGGGAAAAGCCGTTGGCCTCTGCGGCAGCTAAAGCCATCCATAACATCTGCTCGGTGTGTCGAGACCACATGGCGCAGCACTTCCAGGGCCTGCTGGACATCGCCCGCTCTCTCGACTCATTTGCCCTGTCAACAGACGCCGCCGTTGGCTTGCTCAAAGGTACAGCGCTGGTTTTGGCCCGTCTCCCGCTGGAGAAGATTGCGGAGTGTCTGAACGATCTGTGCGCAGTTCAAGTCATGGCACTTAAGAAGCTGCTGGCTCAGGACTCCAGTAGTGGGAAGTCGTCAGACCCTACTGTATGGCTGGACAGACTGGCTGTTATCTTCAGACACACAAATCCTATAGTAGAAAATGGGCAGACACATCCCTGCCAGAAAGTCATCCAAGAGATCTGGCCTGTGTTGTCAGAGACGCTAAACGCTCACCAGAGTGATAACCGGATAGTGGAGCGCTGCTGTCGCTGCCTGAGATTTGCAGTGCGTTGTGTTGGCAAAGGCTCTGCTTCTTTACTGCAACCACTGGTTACTCAGATGGTGAGTGTGTACCAGCTGTACCCTCACTCCTGTTTCCTGTACCTGGGCAGCATTCTGGTGGATGAGTATGGCATGGAGGAAGGATGCAGACAAGGCCTGTTGGATATGCTACAGGCACTCTGTATGCCAACGTTCCAGCTGTTAGAGCAGCCTAATGGACTGCGCAATCACCCAGACACAGTGGACGATCTTTTTAGGCTCGCCACAAGgtTTGTCCAGCGTAGTCCAGTCACATTGCTGAGCAGCAGTATTATCGTCCACATCATCCAGTGTGCCATCGCTGCCACCACCCTGGATCACCGAGATGCCAACTGCAGCGTCATGAAGTTCATCCGAGACCTCATTCACACCGGCGTCACCAACGACCATGAGGACGACTTTGAGGTGCGGAAGCGTCTGATTGGCCAGGCGATGGAGCAGCACGGCCAGCAGCTGGTCAATCAGCTGATCAATACCTGCTGTTTCTGTCTGCCACCGTACACTCTGCCTGATGTAGCCGAGGTGCTCTGGGAGATTATGGTCTTTGATCGACCGACGTTTTGTCGCTGGCTGGAAACCACACTTAAGGGTCTTCCTAAAGAAACAGCAGGGGGCGCTGTCACCGTCACACACAAACAGCTCACTGACTTCCACAAGCAGGTCACGAGgtcagattttttgttttgctaa
>TCONS_00053581
GGACTTGTTTGACAGGAACGCCCTGTGTCTTGCTTGAGATGGCGGCCAGATCGGAGAACGCGAGGGCCGAATAAATAGTCAACCTGCGCGTCAGTAACCTCCCGAGAAGCGCAAGCAGTGTCATTTACCCCATATCTACACCCTCTAGAAGCAGAAGAGCACCATGGAAGGCGGGAAACCCACCCTGCCGCTGGTTTACCAGGCCGTGCAGGCGCTGTATCACGACCCGGACCCTGCCGGCAAGGAGCGCGCCTCGGTCTGGCTAGGAGAGCTGCAGAGATCGATGTACGCGTGGGAAATCTCCGATCAGCTCCTGCAGCTGAAACAGGACATCGAGTCTTGTTACTTCGCAGCCCAGACGATGAAGATGAAGATCCAGACGTCGTTCTACGAGCTTCCCCCAGATTCTCACACTGCACTGAGAGATTCACTCTTATCTCACATCCAGAACCTCAAAGACCTTTCTCCCATCATCGTCACACAGCTCGCATTGGCAATCGCAGATCTGGCTCTTCAGATGGCCTCGTGGAAAGGCTGCGTTCACACCCTCATAGAAAAATACAGTAACGATGTATCCTCCATGACTTTCCTGATTGAGATACTCACAGTGCTGCCGGAGGAGGTACATAGTCGCTCTCTGAGGATTGGAGCCAACAGACGGACAGAGATTATTGAGGATCTGGCCTATTACTCTACCACAGTGGTCACTCTTCTGGTGACGTGTGCGGAGAAGTCTGGCCACGACGAGAAGATGCTCATCAAGGTGTTCCGATGTTTGGGGAGCTGGTTTAATTTAGGAGTGCTGGACAACAATTTCATGGCAAACAATCAACTGCTGATGATTCTCTTCCAAGTGCTGCAGAGGGATGAGACGTCTACAAACCTGCATGAGGCAGCATCAGACTGCGTATGCTCAGCATTGTATGCAATCGAGAATGTGGCCATTCACCTGCCGCTGGCCATGCAGCTCTTCCAGGGAGTCCTTACTTTAGAAACAGCCTACCACATGGCCGTGGCCCGAGAAGACCTCGACAAGGTGCTAAATTATTGCCGAATCTTTACTGAATTGTGCGAGACGTTTTTGGAGATGACGGTAAGGACACCAGGACAGGGCATGGGAGATCTGCGCACACTAGAGTTGCTGCTTATTTGTGCAGGACATCCCCAGTATGAGGTGGTTGAGATCTCGTTTAACTTCTGGTACCGTCTGGGAGAGCATCTTTATAAAATCAACGATCCGGCACTCCATAATGTTTTTAGGCCATACATTCAGAGATTACTGCACAGTCTTGCCCGCCACTGCCAACTCGACCCAGATCACGAAGGAGTTCCAGAGGACACCGATGATTTTGGAGAGTTTAGGATGAGAGTATCTGATCTTGTTAAAGATGTGATTTTCTTAGTTGGCTCTATGGAGTGCTTTGCACAGCTGTATTCAACTTTGAGGGAGGGAAACCCCCCATGGGAAGTAACTGAGGCTGTTCTGTTCATCATGGCTTCCATCGCTAAGAATGTTGATCCTGAGAATAATCCCACCTTAATGGAGGTGCTGGAGCAAATAGTGTTGCTTCCTGAGACGGTTCACCTTGCCGTTCGCTACACCAGTATTGAGCTGGTCGGAGAGATGAGCGAAGTGATCGACCGCAACCCTTCCATGTTAGATACTGTTTTGAACTTCCTGATGAAGGGTTTACGGGAAAAGCCGTTGGCCTCTGCGGCAGCTAAAGCCATCCATAACATCTGCTCGGTGTGTCGAGACCACATGGCGCAGCACTTCCAGGGCCTGCTGGACATCGCCCGCTCTCTCGACTCATTTGCCCTGTCAACAGACGCCGCCGTTGGCTTGCTCAAAGGTACAGCGCTGGTTTTGGCCCGTCTCCCGCTGGAGAAGATTGCGGAGTGTCTGAACGATCTGTGCGCAGTTCAAGTCATGGCACTTAAGAAGCTGCTGGCTCAGGACTCCAGTAGTGGGAAGTCGTCAGACCCTACTGTATGGCTGGACAGACTGGCTGTTATCTTCAGACACACAAATCCTATAGTAGAAAATGGGCAGACACATCCCTGCCAGAAAGTCATCCAAGAGATCTGGCCTGTGTTGTCAGAGACGCTAAACGCTCACCAGAGTGATAACCGGATAGTGGAGCGCTGCTGTCGCTGCCTGAGATTTGCAGTGCGTTGTGTTGGCAAAGGCTCTGCTTCTTTACTGCAACCACTGGTTACTCAGATGGTGAGTGTGTACCAGCTGTACCCTCACTCCTGTTTCCTGTACCTGGGCAGCATTCTGGTGGATGAGTATGGCATGGAGGAAGGATGCAGACAAGGCCTGTTGGATATGCTACAGGCACTCTGTATGCCAACGTTCCAGCTGTTAGAGCAGCCTAATGGACTGCGCAATCACCCAGACACAGTGGACGATCTTTTTAGGCTCGCCACAAGgtTTGTCCAGCGTAGTCCAGTCACATTGCTGAGCAGCAGTATTATCGTCCACATCATCCAGTGTGCCATCGCTGCCACCACCCTGGATCACCGAGATGCCAACTGCAGCGTCATGAAGTTCATCCGAGACCTCATTCACACCGGCGTCACCAACGACCATGAGGACGACTTTGAGGTGCGGAAGCGTCTGATTGGCCAGGCGATGGAGCAGCACGGCCAGCAGCTGGTCAATCAGCTGATCAATACCTGCTGTTTCTGTCTGCCACCGTACACTCTGCCTGATGTAGCCGAGGTGCTCTGGGAGATTATGGTCTTTGATCGACCGACGTTTTGTCGCTGGCTGGAAACCACACTTAAGGGTCTTCCTAAAGAAACAGCAGGGGGCGCTGTCACCGTCACACACAAACAGCTCACTGACTTCCACAAGCAGGTCACGAGTGCAGAGGAATGTAAACAGGTTTGTTGGGCCATAAGAGAGTTTACCAGGCTGTACCGATAGCTGTCTTCTACCTGCTGATGCTGCAAGAccaggtcagattttttgttttgctaaCATTTGGAGGAAGTGGCAAAGGGAGCCATGATGACCACTGTTGAGAAACTAAAGGGAACTCTTGCATGAAGGATTTGTGGGACTTGGCACCATGGGAAAGCCGACCAATTTGGATTGGAGCTTCGGAGCGGCAGGGTTTCAGGAAAAGCAAATTGCCTTGTGGGTGTCAAAAAGAGCGCAGCCCCCATTCCTCCCTTTTCCACCCCTACGAGCAcactgatgtcagctgcagacaGAGAACAGAGGGACATTGCCGTCTTGAGGGAGGGTGGGCATCGAATGgacattaaaaacacacacacacacgcactcacacacactcatttcaaAATATGAACCGATTTCTTGGGATCCAACAATCGACAAATAAGGATGTGCCTGGTTGCAAATCAtaatgcatcattaaaaaaagagagacttgtacgtttttaaaaacaaaatggagATTTATTTTCATGGACGTTTGTTTAGAGATGAAGACATGGCTTTGCTGCCAGTGCCATAAAAATGATTACCAAACTAAAGATTGTCACAGCAGCAGCCTCCGCCTGTGGGACGTTTACGAAGGGAGAATCTCGGGTGAATCCGCGTCACCCTTGATCTTTTTAAAGTTGGCTGGGATTTTATCCGTACAGGTTTTGCTGTAAATTATGGAGTGGACTGACTggcagatgcttttttttttctttttttttttctttgttctttcaACATTTTCGGCACATCGCAAAGATTGCGTTTTAGGAGCAGCGTGTGCAACCAATTGTGCgaacaaaaataaaaccaacgTTGTGAGGAACAAACT
>TCONS_00053582
GGACTTGTTTGACAGGAACGCCCTGTGTCTTGCTTGAGATGGCGGCCAGATCGGAGAACGCGAGGGCCGAATAAATAGTCAACCTGCGCGTCAGTAACCTCCCGAGAAGCGCAAGCAGTGTCATTTACCCCATATCTACACCCTCTAGAAGCAGAAGAGCACCATGGAAGGCGGGAAACCCACCCTGCCGCTGGTTTACCAGGCCGTGCAGGCGCTGTATCACGACCCGGACCCTGCCGGCAAGGAGCGCGCCTCGGTCTGGCTAGGAGAGCTGCAGAGATCGATGTACGCGTGGGAAATCTCCGATCAGCTCCTGCAGCTGAAACAGGACATCGAGTCTTGTTACTTCGCAGCCCAGACGATGAAGATGAAGATCCAGACGTCGTTCTACGAGCTTCCCCCAGATTCTCACACTGCACTGAGAGATTCACTCTTATCTCACATCCAGAACCTCAAAGACCTTTCTCCCATCATCGTCACACAGCTCGCATTGGCAATCGCAGATCTGGCTCTTCAGATGGCCTCGTGGAAAGGCTGCGTTCACACCCTCATAGAAAAATACAGTAACGATGTATCCTCCATGACTTTCCTGATTGAGATACTCACAGTGCTGCCGGAGGAGGTACATAGTCGCTCTCTGAGGATTGGAGCCAACAGACGGACAGAGATTATTGAGGATCTGGCCTATTACTCTACCACAGTGGTCACTCTTCTGGTGACGTGTGCGGAGAAGTCTGGCCACGACGAGAAGATGCTCATCAAGGTGTTCCGATGTTTGGGGAGCTGGTTTAATTTAGGAGTGCTGGACAACAATTTCATGGCAAACAATCAACTGCTGATGATTCTCTTCCAAGTGCTGAGGGATGAGACGTCTACAAACCTGCATGAGGCAGCATCAGACTGCGTATGCTCAGCATTGTATGCAATCGAGAATGTGGCCATTCACCTGCCGCTGGCCATGCAGCTCTTCCAGGGAGTCCTTACTTTAGAAACAGCCTACCACATGGCCGTGGCCCGAGAAGACCTCGACAAGGTGCTAAATTATTGCCGAATCTTTACTGAATTGTGCGAGACGTTTTTGGAGATGACGGTAAGGACACCAGGACAGGGCATGGGAGATCTGCGCACACTAGAGTTGCTGCTTATTTGTGCAGGACATCCCCAGTATGAGGTGGTTGAGATCTCGTTTAACTTCTGGTACCGTCTGGGAGAGCATCTTTATAAAATCAACGATCCGGCACTCCATAATGTTTTTAGGCCATACATTCAGAGATTACTGCACAGTCTTGCCCGCCACTGCCAACTCGACCCAGATCACGAAGGAGTTCCAGAGGACACCGATGATTTTGGAGAGTTTAGGATGAGAGTATCTGATCTTGTTAAAGATGTGATTTTCTTAGTTGGCTCTATGGAGTGCTTTGCACAGCTGTATTCAACTTTGAGGGAGGGAAACCCCCCATGGGAAGTAACTGAGGCTGTTCTGTTCATCATGGCTTCCATCGCTAAGAATGTTGATCCTGAGAATAATCCCACCTTAATGGAGGTGCTGGAGCAAATAGTGTTGCTTCCTGAGACGGTTCACCTTGCCGTTCGCTACACCAGTATTGAGCTGGTCGGAGAGATGAGCGAAGTGATCGACCGCAACCCTTCCATGTTAGATACTGTTTTGAACTTCCTGATGAAGGGTTTACGGGAAAAGCCGTTGGCCTCTGCGGCAGCTAAAGCCATCCATAACATCTGCTCGGTGTGTCGAGACCACATGGCGCAGCACTTCCAGGGCCTGCTGGACATCGCCCGCTCTCTCGACTCATTTGCCCTGTCAACAGACGCCGCCGTTGGCTTGCTCAAAGGTACAGCGCTGGTTTTGGCCCGTCTCCCGCTGGAGAAGATTGCGGAGTGTCTGAACGATCTGTGCGCAGTTCAAGTCATGGCACTTAAGAAGCTGCTGGCTCAGGACTCCAGTAGTGGGAAGTCGTCAGACCCTACTGTATGGCTGGACAGACTGGCTGTTATCTTCAGACACACAAATCCTATAGTAGAAAATGGGCAGACACATCCCTGCCAGAAAGTCATCCAAGAGATCTGGCCTGTGTTGTCAGAGACGCTAAACGCTCACCAGAGTGATAACCGGATAGTGGAGCGCTGCTGTCGCTGCCTGAGATTTGCAGTGCGTTGTGTTGGCAAAGGCTCTGCTTCTTTACTGCAACCACTGGTTACTCAGATGGTGAGTGTGTACCAGCTGTACCCTCACTCCTGTTTCCTGTACCTGGGCAGCATTCTGGTGGATGAGTATGGCATGGAGGAAGGATGCAGACAAGGCCTGTTGGATATGCTACAGGCACTCTGTATGCCAACGTTCCAGCTGTTAGAGCAGCCTAATGGACTGCGCAATCACCCAGACACAGTGGACGATCTTTTTAGGCTCGCCACAAGgtTTGTCCAGCGTAGTCCAGTCACATTGCTGAGCAGCAGTATTATCGTCCACATCATCCAGTGTGCCATCGCTGCCACCACCCTGGATCACCGAGATGCCAACTGCAGCGTCATGAAGTTCATCCGAGACCTCATTCACACCGGCGTCACCAACGACCATGAGGACGACTTTGAGGTGCGGAAGCGTCTGATTGGCCAGGCGATGGAGCAGCACGGCCAGCAGCTGGTCAATCAGCTGATCAATACCTGCTGTTTCTGTCTGCCACCGTACACTCTGCCTGATGTAGCCGAGGTGCTCTGGGAGATTATGGTCTTTGATCGACCGACGTTTTGTCGCTGGCTGGAAACCACACTTAAGGGTCTTCCTAAAGAAACAGCAGGGGGCGCTGTCACCGTCACACACAAACAGCTCACTGACTTCCACAAGCAGGTCACGAGTGCAGAGGAATGTAAACAGGTTTGTTGGGCCATAAGAGAGTTTACCAGGCTGTACCGATAGCTGTCTTCTACCTGCTGATGCTGCAAGAccaggtcagattttttgttttgctaaCATTTGGAGGAAGTGGCAAAGGGAGCCATGATGACCACTGTTGAGAAACTAAAGGGAACTCTTGCATGAAGGATTTGTGGGACTTGGCACCATGGGAAAGCCGACCAATTTGGATTGGAGCTTCGGAGCGGCAGGGTTTCAGGAAAAGCAAATTGCCTTGTGGGTGTCAAAAAGAGCGCAGCCCCCATTCCTCCCTTTTCCACCCCTACGAGCAcactgatgtcagctgcagacaGAGAACAGAGGGACATTGCCGTCTTGAGGGAGGGTGGGCATCGAATGgacattaaaaacacacacacacacgcactcacacacactcatttcaaAATATGAACCGATTTCTTGGGATCCAACAATCGACAAATAAGGATGTGCCTGGTTGCAAATCAtaatgcatcattaaaaaaagagagacttgtacgtttttaaaaacaaaatggagATTTATTTTCATGGACGTTTGTTTAGAGATGAAGACATGGCTTTGCTGCCAGTGCCATAAAAATGATTACCAAACTAAAGATTGTCACAGCAGCAGCCTCCGCCTGTGGGACGTTTACGAAGGGAGAATCTCGGGTGAATCCGCGTCACCCTTGATCTTTTTAAAGTTGGCTGGGATTTTATCCGTACAGGTTTTGCTGTAAATTATGGAGTGGACTGACTggcagatgcttttttttttctttttttttttctttgttctttcaACATTTTCGGCACATCGCAAAGATTGCGTTTTAGGAGCAGCGTGTGCAACCAATTGTGCgaacaaaaataaaaccaacgTTGTGAGGAACAAACTAA
>TCONS_00053583
TGTATTCAACTTTGAGGGAGGGAAACCCCCCATGGGAAGTAACTGAGGCTGTTCTGTTCATCATGGCTTCCATCGCTAAGAATGTTGATCCTGAGAATAATCCCACCTTAATGGAGGTGCTGGAGCAAATAGTGTTGCTTCCTGAGACGGTTCACCTTGCCGTTCGCTACACCAGTATTGAGCTGGTCGGAGAGATGAGCGAAGTGATCGACCGCAACCCTTCCATGTTAGATACTGTTTTGAACTTCCTGATGAAGGGTTTACGGGAAAAGCCGTTGGCCTCTGCGGCAGCTAAAGCCATCCATAACATCTGCTCGGTGTGTCGAGACCACATGGCGCAGCACTTCCAGGGCCTGCTGGACATCGCCCGCTCTCTCGACTCATTTGCCCTGTCAACAGACGCCGCCGTTGGCTTGCTCAAAGGTATCAGGAAAGGGTCTTTAAAAAGTTACTTTTCCCCTTCACTATTCTGCGGTTTGCAGAAGGTACACACTTCTCCTCTAGCGCTTGACCCTTTTCTGTTGTTCTTAGTCATGCCCTTGTTGTATGGCTGGTTTGGTTTAAGAGGTGTGATTGGTTTACTTAGGTACAGCGCTGGTTTTGGCCCGTCTCCCGCTGGAGAAGATTGCGGAGTGTCTGAACGATCTGTGCGCAGTTCAAGTCATGGCACTTAAGAAGCTGCTGGCTCAGGACTCCAGTAGTGGGAAGTCGTCAGACCCTACTGTATGGCTGGACAGACTGGCTGTTATCTTCAGACACACAAATCCTATAGTAGAAAATGGGCAGACACATCCCTGCCAGAAAG

Function

symbol description
tnpo3 Acts upstream of or within RNA splicing; T cell differentiation; and mRNA processing. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in autosomal dominant limb-girdle muscular dystrophy type 2. Orthologous to human TNPO3 (transportin 3).

GO:

id name namespace
GO:0006606 protein import into nucleus biological_process
GO:0006397 mRNA processing biological_process
GO:0030217 T cell differentiation biological_process
GO:0008380 RNA splicing biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-708 Acts upstream of or within RNA splicing; T cell differentiation; and mRNA processing. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in autosomal dominant limb-girdle muscular dystrophy type 2. Orthologous to human TNPO3 (transportin 3).

Ensembl:

ensembl_id ENSDARG00000045680

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053580 False 3130 mRNA 0.51 22 13586455 13604351
TCONS_00053581 False 3794 mRNA 0.50 23 13586689 13605156
TCONS_00053582 False 3793 mRNA 0.50 23 13586689 13605158
TCONS_00053583 True 805 lncRNA 0.50 5 13593531 13597427

Neighbor

gene id symbol gene type direction distance location
XLOC_027191 NA coding upstream 272 13584054 ~ 13586183 (+)
XLOC_027190 calua coding upstream 10240 13568469 ~ 13576215 (+)
XLOC_027189 NA coding upstream 93099 13489682 ~ 13493356 (+)
XLOC_027188 NA coding upstream 116558 13468591 ~ 13469897 (+)
XLOC_027187 dyrk2 coding upstream 123671 13449775 ~ 13462784 (+)
XLOC_027193 ccdc87 coding downstream 10573 13615731 ~ 13624294 (+)
XLOC_027194 pnpla8 coding downstream 20734 13625892 ~ 13643616 (+)
XLOC_027195 nrcama coding downstream 91379 13696537 ~ 13728375 (+)
XLOC_027196 cntn1b coding downstream 128680 13733838 ~ 13756716 (+)
XLOC_027197 pdzrn4 coding downstream 205653 13810811 ~ 13861445 (+)
XLOC_027184 BX470116.1 non-coding upstream 311820 13270792 ~ 13274635 (+)
XLOC_027183 NA non-coding upstream 388590 13178158 ~ 13197865 (+)
XLOC_027198 NA non-coding downstream 271746 13876904 ~ 13890091 (+)
XLOC_027200 CU469420.1 non-coding downstream 501353 14106511 ~ 14108810 (+)
XLOC_027201 CU469420.2 non-coding downstream 511208 14116366 ~ 14119559 (+)
XLOC_027202 NA non-coding downstream 544902 14150060 ~ 14158028 (+)
XLOC_027203 NA non-coding downstream 557185 14162343 ~ 14167862 (+)

Expression


Co-expression Network