Gene
RNA
| Item | Value |
|---|---|
| gene id | G818944 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 53870817 ~ 53872027 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU931355 | True | 497 | lncRNA | 0.42 | 3 | 53870817 | 53872027 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532391 | LOC106571996 | coding | upstream | 197319 | 53596083 ~ 53676213 (+) |
| LOC110532390 | gbrd | coding | upstream | 445124 | 53404905 ~ 53425693 (+) |
| LOC110532385 | LOC106572000 | coding | upstream | 656055 | 53202981 ~ 53214762 (+) |
| LOC110532383 | LOC106572002 | coding | upstream | 716689 | 53128438 ~ 53154128 (+) |
| LOC110532379 | LOC106572005 | coding | upstream | 748953 | 53043077 ~ 53121864 (+) |
| LOC118966073 | NA | coding | downstream | 359722 | 54231749 ~ 54233447 (+) |
| LOC110532392 | dffb | coding | downstream | 362769 | 54234796 ~ 54239506 (+) |
| LOC110532396 | LOC106571991 | coding | downstream | 373296 | 54245323 ~ 54249584 (+) |
| LOC110532395 | LOC106571990 | coding | downstream | 422995 | 54295022 ~ 54306173 (+) |
| twist3 | LOC106572367 | coding | downstream | 1054701 | 54926728 ~ 54934570 (+) |
| G818740 | NA | non-coding | upstream | 165983 | 53704630 ~ 53704834 (+) |
| G818737 | NA | non-coding | upstream | 167223 | 53703384 ~ 53703594 (+) |
| G818733 | NA | non-coding | upstream | 169324 | 53701044 ~ 53701493 (+) |
| G818719 | NA | non-coding | upstream | 178107 | 53692273 ~ 53692710 (+) |
| G819270 | NA | non-coding | downstream | 220956 | 54092983 ~ 54093204 (+) |
| G819287 | NA | non-coding | downstream | 235349 | 54107376 ~ 54107684 (+) |
| G819292 | NA | non-coding | downstream | 240518 | 54112545 ~ 54112750 (+) |
| G819295 | NA | non-coding | downstream | 242944 | 54114971 ~ 54115547 (+) |
| G819308 | NA | non-coding | downstream | 251649 | 54123676 ~ 54123926 (+) |
| LOC110532368 | LOC106572016 | other | upstream | 1143297 | 52692676 ~ 52734929 (+) |
| LOC110532349 | LOC106591969 | other | upstream | 1545177 | 52323001 ~ 52325924 (+) |
| G815767 | casz1 | other | upstream | 2524323 | 51345372 ~ 51346494 (+) |
| G815610 | NA | other | upstream | 2791875 | 51078447 ~ 51078942 (+) |
| G815428 | NA | other | upstream | 3070436 | 50796214 ~ 50800381 (+) |
| G819897 | NA | other | downstream | 854844 | 54726871 ~ 54727376 (+) |
| G820665 | NA | other | downstream | 1361231 | 55233258 ~ 55233798 (+) |
| dlgap4a | dlgap4 | other | downstream | 1659010 | 55531033 ~ 55647541 (+) |
| G820944 | NA | other | downstream | 1825613 | 55697640 ~ 55697978 (+) |
| G821363 | uhrf1bp1 | other | downstream | 2102015 | 55974042 ~ 55975316 (+) |
