XLOC_027195 (nrcama)


Basic Information

Item Value
gene id XLOC_027195
gene name nrcama
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 13696537 ~ 13728375 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053589
CACAAGGCCCAGTTGCTTTGACCTGGAGGGGAAGGATTTTGATGTAACGCAGCCTTGCCATGGACGGGAAGAGGAGCTGCTCGCTCTGTGGAGGAgcgatgatgataatgatgatgatgatgatgatcagtcACATGACCTCCGCATTAGAAGTGCCTCTAGACTTGCCTCAGCCTCCAACAATAACTAATCAGTCCCCCAAGGATTATATCATCGACCCTCGGGAGAACATCAATATCTTCTGCGAGGCGAAAGGAAAGCCTCATCCCAGCTTTTCATGGACACGTAACGGCACGCATTTTGATGTGGAAAAGGATCCCAAAGTTGTCATGATGCCCGGCACAGGCAATCTAGTCATCGACATCAGCGGAGAGAAGGCTGAGGTTTATGAGGGTGTTTATCAGTGCATCGCCCGCAACGAGCACGGCTCTGCTGTGTCCAATAACATCGTCATCCGTCAATCAAGGTCCCCCTTGTGGTCAAAAGAGAAAAACGAACCAATCACAGTGCAGAGAGGAACGTCTCTAATACTGCAGTGCAGACCCCCAGCTGGCCTGCCTCCTCCTATCATCTTCTGGATGGATAACAATTTCCAGAGACTTCCCCAGAACAGTCGTGTGTCGCAGGCTTTAAACGGAGACCTGTATTTCTCCAACGTGATCATGGAAGACACCAGAAACGACTACATCTGCTACGCCCGCTTCCCACACACTCAGACTATCCAACAGAAACAGCCCATCACCGTCAAAGTGCTGGACAACAGTCCATCTGGGGAGAGAGTGCCCTCTTTTCTGCATCCACCAGGAATGGAAAGTACCACCATGGTCTTGAAAGGAGATACGCTGGAACTGGAATGCATTGCAGATGGCCTTCCAACGCCAAATATCTCCTGGACTAAGGTGAACGGGGAGCTGCCAAGTGGGCGTTTTTCATTTTACAGTTTCCAGAAAACTCTGAAGATAAAAGAGGTGACAGAAGCAGACGGGGGAGATTACCGATGTATAGCCAAGAATCGCATGGGGAGCAGCCAACACACCATCACCGTAGTGGTCAGAGCGGCTCCCTTTTGGATCAGTGCCCCTCAGAACCTCATCTTGGCCCCAAAAGAGACTGGAAACCTCACCTGCGATGTTGATGGAAACCCTAAACCCACAATTACATGGTCTGTCAATGGAAATCCCATTGAAAGCTCACATAATGACCCAAGCCGCAAAGTGTCAGATGGCGTCATCACCCTCAGTGACGTTCAGACAGGCTCCAGCGCCGTCTACCAGTGCAACGCCTCTAATGATTACGGTTACCTGCTGGCCAATGCCTTTGTCAGTGTACTAGCTGAACCACCAAGAGTGCTGACGTCTCTAAATCACGAGTACTCAGTCATCAGTAACAGCAGAGCTCTGTTAGACTGTGCTTCTTTTGGCTCGCCACTTCCAAAAATCACATGGTTTAAAGACAGTCAGAGTATACTGAACAGTGACTTGTACCACATTCATAAGAACGGTACATTAGAGATCAATGTAGCTCAGCCACAAAACAGCGGCAAGTACACTTGTATAGCATCAAACAATCTTGGCAACAAAGAGAATCACGTCCACCTGCAAGTGAAAGAGCCTACACGAATCATCAGGCAGCCGGAGTATAAAGAGGTCCAGAGGAACTCCATAGCTGTGTTCGAGTGTAAGGTCAAACATGATCCCACTCTCATTCCCTCCATGATATGGCTTAAAGACAACGGAGAGCTTCCTGACGACCCTCGATTTGAGGTTGGCTCTGATAGTCTGACTATACATGATGTGACAGAGGATGATGAAGGCACCTACACCTGCATCAGAAACACCACCCTGGACCAAGATTCAGCCAGCGCCACACTCACAGTAGTCGAGCAACCGGACCCACCAACTGACCTGGAGCTGACTGACCAGCGCGAGCGCAGTGTTCGGCTAACATGGACCCCTGGAGATGAACACAACAGCCCGATTAAATTGTTCCTGATCCAGTATGAAGATTCACTCCATGAGCCTGGAGTCTGGCTCAATATGACCGAGGTCTCGGGAACCAGCACAACAGCCCAGCTGGAGTTGTCCCCCTATGTGTATTACTCCTTCAGGGTTCTGGCACTCAATGGCGTGGGTCTGAGTGAATCCAGCGATCCATCTAGACAGTACAGAACCAATCCTGCAAAGCCTGATGTGAATCCATCAGATGTTGAAGTCAGTGGAACATCACCTGACACTATGACAATATCTTGGAGGGAGCTGAGTGGCCTTGAGTCTAATGGTCCAGGTTTACAGTACAAGGTGAGCTGGAGAATGAAAGATGCGGAGCAGTGGACGACAGTCACGCTGGCCAATGTCTCGCAGCATGTGGTGACAGGAACACCCACTTTTACACTTTATGAAGTCACTGTACAGGCGGTCAATGATTATGGAGAAGGCCCCAGACCAGAGGTGGTGCTGGGATACTCAGGAGAAAACTCACCCACAGTGGCCCCAGAGAACGTAAAAGTTTCAGTTCAGAGCGGGACAGAGGCTGAAGTGCACTGGGAAGCTGTTCCTCTTTCATCAGTCCGGGGTCGACTGAAAGGATACAAGGTGACGTATCAGAAGATGAGAAGTTTACACAAGCAAGACTATGATCGTGAGAATCCCCAGGTGCTCATCTTCAGTGGGGAGGAGACTGTGGGACGTCTGCCAGACCTTCACCCCTACAGCCATTACAGACTCAACATCAGAGCCTTCAACGGGCATGGAGACGGACCCTCCAGCACTGACCAGCAGTTCCAGACACCAGAGGGAGTTCCTGGGCCTCCTACAAATGTAAACATCCGGAATCTGAACCTGGACTCTTTGCTGGTGGAGTGGACACCACCTTTGGAAGACAACGGACACTTGACTGGATACTTGTTGAAATATCAGCCAATCAATACAACAGAAGAAGCTGGACTGCTCAAAGAAGTCCTTTTACCAGCAAACGAGACCAGTTACACACTCGACAAGCTTACGCACAGCACACACTACAAGTTCTTCCTGAACGCCATGACTGAAACAGGCTCGGGACCTGCTGTCACTAAAGAGGCCTTCACAGAAGTGGACGAAGCGTTAATTCGACATCCCGCAGTAGAGGCGGGTAAAGGCTCTGCCCCCccttcaccaccaccaccaactcCCCCTGTCACTCAATCTTTGCAGCCCCCGTTTCAGGcgccacctgctggtccGATGTTTGGAAACGTGAACTCCTCGGTGAAGGAGGACCATGCAGTCATAAGCTGGGAATACTTGGGGCCCGATGGGAATGTTTATGTGGAATATGTTGTTGATAACAGTAAAGAACCCTGGAAAACCGAGTTTGTAAATGGCACTCGGACATTTCAGATTAGAGGACTAAAGCCGGGGATGTCCTATAGGGTCCGATTGGTAGCCAAAGACCATTCAGACGCAACCATCCACAGTACACAAGAGATGTTGATAACAGTTCCAGccatgaccaacaggcaggctgaaatAGCCACACAAGGTTGGTTTATCGGTCTGATGTGTGCCATCGCTTTGCTGATCCTGGTGCTCCTCATCGTCTGCTTTATAAAGAGGAACAAAGGAGGCAAATATCCAGtaaaagagAAAGAAGATGCCCATCAAGACCCAGAGATTCAGCCTATGAAAGAGGATGATGGGACATTTGGGGAGTACAGGTCTTTAGAAAGTGATACGGAGGATCACAAGCCCCTAAAGGGCAGCCGGACACCATCCAATGGCACGGTCAAGAAGGACGACAGTGACGACAGCCTGGTGGATTACGGCGAGGGAGGAGACGGCCAGTTTAATGAGGATGGGTCGTTCATTGGCCAGTACAGCGGGAAGAAGGAAAAAGACACTGCGGAGGGAAACGAGAGTTCGGAGGCTCCTTCTCCAGTCAACGCCATGAACTCCTTTGTGTAACCTTTCATGACCTCCTTTGGCCCATACAACGCCCAACCCCATGTTAC
>TCONS_00053590
GGATTTTGATGTAACGCAGCCTTGCCATGGACGGGAAGAGGAGCTGCTCGCTCTGTGGAGGAgcgatgatgataatgatgatgatgatgatgatcagtcACATGACCTCCGCATTAGAAGTGCCTCTAGACTTGCCTCAGCCTCCAACAATAACTAATCAGTCCCCCAAGGATTATATCATCGACCCTCGGGAGAACATCAATATCTTCTGCGAGGCGAAAGGAAAGCCTCATCCCAGCTTTTCATGGACACGTAACGGCACGCATTTTGATGTGGAAAAGGATCCCAAAGTTGTCATGATGCCCGGCACAGGCAATCTAGTCATCGACATCAGCGGAGAGAAGGCTGAGGTTTATGAGGGTGTTTATCAGTGCATCGCCCGCAACGAGCACGGCTCTGCTGTGTCCAATAACATCGTCATCCGTCAATCAAGGTCCCCCTTGTGGTCAAAAGAGAAAAACGAACCAATCACAGTGCAGAGAGGAACGTCTCTAATACTGCAGTGCAGACCCCCAGCTGGCCTGCCTCCTCCTATCATCTTCTGGATGGATAACAATTTCCAGAGACTTCCCCAGAACAGTCGTGTGTCGCAGGCTTTAAACGGAGACCTGTATTTCTCCAACGTGATCATGGAAGACACCAGAAACGACTACATCTGCTACGCCCGCTTCCCACACACTCAGACTATCCAACAGAAACAGCCCATCACCGTCAAAGTGCTGGACATTGAAGCTATGAATGACACTGTGTTGGCAGCTTTTTTGAATGGCTCAGATTTTTGGGGTGACAGTCCATCTGGGGAGAGAGTGCCCTCTTTTCTGCATCCACCAGGAATGGAAAGTACCACCATGGTCTTGAAAGGAGATACGCTGGAACTGGAATGCATTGCAGATGGCCTTCCAACGCCAAATATCTCCTGGACTAAGGTGAACGGGGAGCTGCCAAGTGGGCGTTTTTCATTTTACAGTTTCCAGAAAACTCTGAAGATAAAAGAGGTGACAGAAGCAGACGGGGGAGATTACCGATGTATAGCCAAGAATCGCATGGGGAGCAGCCAACACACCATCACCGTAGTGGTCAGAGCGGCTCCCTTTTGGATCAGTGCCCCTCAGAACCTCATCTTGGCCCCAAAAGAGACTGGAAACCTCACCTGCGATGTTGATGGAAACCCTAAACCCACAATTACATGGTCTGTCAATGGAAATCCCATTGAAAGCTCACATAATGACCCAAGCCGCAAAGTGTCAGATGGCGTCATCACCCTCAGTGACGTTCAGACAGGCTCCAGCGCCGTCTACCAGTGCAACGCCTCTAATGATTACGGTTACCTGCTGGCCAATGCCTTTGTCAGTGTACTAGCTGAACCACCAAGAGTGCTGACGTCTCTAAATCACGAGTACTCAGTCATCAGTAACAGCAGAGCTCTGTTAGACTGTGCTTCTTTTGGCTCGCCACTTCCAAAAATCACATGGTTTAAAGACAGTCAGAGTATACTGAACAGTGACTTGTACCACATTCATAAGAACGGTACATTAGAGATCAATGTAGCTCAGCCACAAAACAGCGGCAAGTACACTTGTATAGCATCAAACAATCTTGGCAACAAAGAGAATCACGTCCACCTGCAAGTGAAAGAGCCTACACGAATCATCAGGCAGCCGGAGTATAAAGAGGTCCAGAGGAACTCCATAGCTGTGTTCGAGTGTAAGGTCAAACATGATCCCACTCTCATTCCCTCCATGATATGGCTTAAAGACAACGGAGAGCTTCCTGACGACCCTCGATTTGAGGTTGGCTCTGATAGTCTGACTATACATGATGTGACAGAGGATGATGAAGGCACCTACACCTGCATCAGAAACACCACCCTGGACCAAGATTCAGCCAGCGCCACACTCACAGTAGTCGAGCAACCGGACCCACCAACTGACCTGGAGCTGACTGACCAGCGCGAGCGCAGTGTTCGGCTAACATGGACCCCTGGAGATGAACACAACAGCCCGATTAAATTGTTCCTGATCCAGTATGAAGATTCACTCCATGAGCCTGGAGTCTGGCTCAATATGACCGAGGTCTCGGGAACCAGCACAACAGCCCAGCTGGAGTTGTCCCCCTATGTGTATTACTCCTTCAGGGTTCTGGCACTCAATGGCGTGGGTCTGAGTGAATCCAGCGATCCATCTAGACAGTACAGAACCAATCCTGCAAAGCCTGATGTGAATCCATCAGATGTTGAAGTCAGTGGAACATCACCTGACACTATGACAATATCTTGGAGGGAGCTGAGTGGCCTTGAGTCTAATGGTCCAGGTTTACAGTACAAGGTGAGCTGGAGAATGAAAGATGCGGAGCAGTGGACGACAGTCACGCTGGCCAATGTCTCGCAGCATGTGGTGACAGGAACACCCACTTTTACACTTTATGAAGTCACTGTACAGGCGGTCAATGATTATGGAGAAGGCCCCAGACCAGAGGTGGTGCTGGGATACTCAGGAGAAAACTCACCCACAGTGGCCCCAGAGAACGTAAAAGTTTCAGTTCAGAGCGGGACAGAGGCTGAAGTGCACTGGGAAGCTGTTCCTCTTTCATCAGTCCGGGGTCGACTGAAAGGATACAAGGTGACGTATCAGAAGATGAGAAGTTTACACAAGCAAGACTATGATCGTGAGAATCCCCAGGTGCTCATCTTCAGTGGGGAGGAGACTGTGGGACGTCTGCCAGACCTTCACCCCTACAGCCATTACAGACTCAACATCAGAGCCTTCAACGGGCATGGAGACGGACCCTCCAGCACTGACCAGCAGTTCCAGACACCAGAGGGAGTTCCTGGGCCTCCTACAAATGTAAACATCCGGAATCTGAACCTGGACTCTTTGCTGGTGGAGTGGACACCACCTTTGGAAGACAACGGACACTTGACTGGATACTTGTTGAAATATCAGCCAATCAATACAACAGAAGAAGCTGGACTGCTCAAAGAAGTCCTTTTACCAGCAAACGAGACCAGTTACACACTCGACAAGCTTACGCACAGCACACACTACAAGTTCTTCCTGAACGCCATGACTGAAACAGGCTCGGGACCTGCTGTCACTAAAGAGGCCTTCACAGAAGTGGACGAAGCGTTAATTCGACATCCCGCAGTAGAGGCGGGTAAAGcgccacctgctggtccGATGTTTGGAAACGTGAACTCCTCGGTGAAGGAGGACCATGCAGTCATAAGCTGGGAATACTTGGGGCCCGATGGGAATGTTTATGTGGAATATGTTGTTGATAACAGTAAAGAACCCTGGAAAACCGAGTTTGTAAATGGCACTCGGACATTTCAGATTAGAGGACTAAAGCCGGGGATGTCCTATAGGGTCCGATTGGTAGCCAAAGACCATTCAGACGCAACCATCCACAGTACACAAGAGATGTTGATAACAGTTCCAGccatgaccaacaggcaggctgaaatAGCCACACAAGGTTGGTTTATCGGTCTGATGTGTGCCATCGCTTTGCTGATCCTGGTGCTCCTCATCGTCTGCTTTATAAAGAGGAACAAAGGAGGCAAATATCCAGtaaaagagAAAGAAGATGCCCATCAAGACCCAGAGATTCAGCCTATGAAAGAGGATGATGGGACATTTGGGGAGTACAGTGATACGGAGGATCACAAGCCCCTAAAGGGCAGCCGGACACCATCCAATGGCACGGTCAAGAAGGACGACAGTGACGACAGCCTGGTGGATTACGGCGAGGGAGGAGACGGCCAGTTTAATGAGGATGGGTCGTTCATTGGCCAGTACAGCGGGAAGAAGGAAAAAGACACTGCGGAGGGAAACGAGAGTTCGGAGGCTCCTTCTCCAGTCAACGCCATGAACTCCTTTGTGTAACC
>TCONS_00053591
ATTTTGATGTAACGCAGCCTTGCCATGGACGGGAAGAGGAGCTGCTCGCTCTGTGGAGGAgcgatgatgataatgatgatgatgatgatgatcagtcACATGACCTCCGCATTAGAAGTGCCTCTAGACTTGCCTCAGCCTCCAACAATAACTAATCAGTCCCCCAAGGATTATATCATCGACCCTCGGGAGAACATCAATATCTTCTGCGAGGCGAAAGGAAAGCCTCATCCCAGCTTTTCATGGACACGTAACGGCACGCATTTTGATGTGGAAAAGGATCCCAAAGTTGTCATGATGCCCGGCACAGGCAATCTAGTCATCGACATCAGCGGAGAGAAGGCTGAGGTTTATGAGGGTGTTTATCAGTGCATCGCCCGCAACGAGCACGGCTCTGCTGTGTCCAATAACATCGTCATCCGTCAATCAAGGTCCCCCTTGTGGTCAAAAGAGAAAAACGAACCAATCACAGTGCAGAGAGGAACGTCTCTAATACTGCAGTGCAGACCCCCAGCTGGCCTGCCTCCTCCTATCATCTTCTGGATGGATAACAATTTCCAGAGACTTCCCCAGAACAGTCGTGTGTCGCAGGCTTTAAACGGAGACCTGTATTTCTCCAACGTGATCATGGAAGACACCAGAAACGACTACATCTGCTACGCCCGCTTCCCACACACTCAGACTATCCAACAGAAACAGCCCATCACCGTCAAAGTGCTGGACAGTAAGTGTTGTTAGACTGCTGCTACAAATAGAGGCACTCATTTCAAACAGACATCTATGTCTATCAGTTTCTTTATGTTGAATTCAAAGTATTTTCGGAGTTAAACATGTTCTGCTGTTCTTACGCATATCAGTCGATAAAATTTGGACTGTTAAATCGTAATATGCAGATTTATTTATCAAATCAATCACTAATagttgcatatttttattttcactttaagAAAACCCTTAAGTGAAGAACATTTCGTAAGACTTTTGCTGTATTGTTGTATATGTGATGTCCAAAATAATCAAAAAGctgcaaaatgtaaaattttatgcatttttaattgcttttatatgttcattttgttcaatattttttaaatggtctAGATACATTTTGTTACAGTAATTGTTTACGAAAACATTAATTTGACAGCCCATGAAAATTATAATCAATAAATATCAGCACTATG

Function

symbol description
nrcama Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human NRCAM (neuronal cell adhesion molecule).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-041210-235 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human NRCAM (neuronal cell adhesion molecule).

Ensembl:

ensembl_id ENSDARG00000006396

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053589 False 3985 mRNA 0.50 29 13696537 13728375
TCONS_00053590 False 3886 mRNA 0.50 28 13696570 13728330
TCONS_00053591 True 1184 mRNA 0.41 5 13696572 13703606

Neighbor

gene id symbol gene type direction distance location
XLOC_027194 pnpla8 coding upstream 52921 13625892 ~ 13643616 (+)
XLOC_027193 ccdc87 coding upstream 72243 13615731 ~ 13624294 (+)
XLOC_027192 tnpo3 coding upstream 91379 13586455 ~ 13605158 (+)
XLOC_027191 NA coding upstream 110354 13584054 ~ 13586183 (+)
XLOC_027190 calua coding upstream 120322 13568469 ~ 13576215 (+)
XLOC_027196 cntn1b coding downstream 5463 13733838 ~ 13756716 (+)
XLOC_027197 pdzrn4 coding downstream 82436 13810811 ~ 13861445 (+)
XLOC_027198 NA coding downstream 148529 13876904 ~ 13890091 (+)
XLOC_027199 pphln1 coding downstream 173083 13901458 ~ 13963440 (+)
XLOC_027200 CU469420.1 coding downstream 378136 14106511 ~ 14108810 (+)
XLOC_027189 NA non-coding upstream 203181 13489682 ~ 13493356 (+)
XLOC_027188 NA non-coding upstream 226640 13468591 ~ 13469897 (+)
XLOC_027184 BX470116.1 non-coding upstream 421902 13270792 ~ 13274635 (+)
XLOC_027183 NA non-coding upstream 498672 13178158 ~ 13197865 (+)
XLOC_027201 CU469420.2 non-coding downstream 387991 14116366 ~ 14119559 (+)
XLOC_027202 NA non-coding downstream 421685 14150060 ~ 14158028 (+)
XLOC_027203 NA non-coding downstream 433968 14162343 ~ 14167862 (+)

Expression


Co-expression Network