G819295


Basic Information

Item Value
gene id G819295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 54114971 ~ 54115547 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU931718
cacataaagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtattttgttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgaagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggttctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU931718 True 577 lncRNA 0.40 1 54114971 54115547

Neighbor

gene id symbol gene type direction distance location
LOC110532391 LOC106571996 coding upstream 441473 53596083 ~ 53676213 (+)
LOC110532390 gbrd coding upstream 689278 53404905 ~ 53425693 (+)
LOC110532385 LOC106572000 coding upstream 900209 53202981 ~ 53214762 (+)
LOC110532383 LOC106572002 coding upstream 960843 53128438 ~ 53154128 (+)
LOC110532379 LOC106572005 coding upstream 993107 53043077 ~ 53121864 (+)
LOC118966073 NA coding downstream 116202 54231749 ~ 54233447 (+)
LOC110532392 dffb coding downstream 119249 54234796 ~ 54239506 (+)
LOC110532396 LOC106571991 coding downstream 129776 54245323 ~ 54249584 (+)
LOC110532395 LOC106571990 coding downstream 179475 54295022 ~ 54306173 (+)
twist3 LOC106572367 coding downstream 811181 54926728 ~ 54934570 (+)
G819292 NA non-coding upstream 2221 54112545 ~ 54112750 (+)
G819287 NA non-coding upstream 7287 54107376 ~ 54107684 (+)
G819270 NA non-coding upstream 21767 54092983 ~ 54093204 (+)
G818944 NA non-coding upstream 242944 53870817 ~ 53872027 (+)
G818740 NA non-coding upstream 410137 53704630 ~ 53704834 (+)
G819308 NA non-coding downstream 8129 54123676 ~ 54123926 (+)
G819327 NA non-coding downstream 21227 54136774 ~ 54136994 (+)
G819338 NA non-coding downstream 33556 54149103 ~ 54187401 (+)
G819387 NA non-coding downstream 92764 54208311 ~ 54208514 (+)
G819401 NA non-coding downstream 109518 54225065 ~ 54225399 (+)
LOC110532368 LOC106572016 other upstream 1387451 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 1789331 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 2768477 51345372 ~ 51346494 (+)
G815610 NA other upstream 3036029 51078447 ~ 51078942 (+)
G815428 NA other upstream 3314590 50796214 ~ 50800381 (+)
G819897 NA other downstream 611324 54726871 ~ 54727376 (+)
G820665 NA other downstream 1117711 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 1415490 55531033 ~ 55647541 (+)
G820944 NA other downstream 1582093 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 1858495 55974042 ~ 55975316 (+)

Expression


Co-expression Network