G819338


Basic Information

Item Value
gene id G819338
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 54149103 ~ 54187401 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU931761
cagacttacacatggaataaacatacatacagtcaataacacaatagaaaaaggctatatacagggtgtgcaaatggtgtgaggaggtaaggcaataaataggccatagtagcaaggtattacaatttagcaaattaacactggagtgatagatgtgcagatgatgatgtgcaagtagaaatactggtgtgcaaatgagcaaaaaagtaaataaaaacaatatggggatgaggtaggtagattggatgggctatttacagatgggctgtgtacagctgcagcgatcggttagctgctcagatagctgatgtttaaagttagtgagggagatataagtcaacttcagtgatttttgcaattcgttccagtcattggcagcagagaactggaaggaaaggcggccaaaagaggaattggctttgggggtgaccggtgaaatatacctgctggagcacgtgctacgggtgggtgatgctatggtgacgagtgagctgagataaggcggggctttagcTAGCAaaaacttatagatgacctggagccagtgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU931761 True 548 lncRNA 0.43 2 54149103 54187401

Neighbor

gene id symbol gene type direction distance location
LOC110532391 LOC106571996 coding upstream 475605 53596083 ~ 53676213 (+)
LOC110532390 gbrd coding upstream 723410 53404905 ~ 53425693 (+)
LOC110532385 LOC106572000 coding upstream 934341 53202981 ~ 53214762 (+)
LOC110532383 LOC106572002 coding upstream 994975 53128438 ~ 53154128 (+)
LOC110532379 LOC106572005 coding upstream 1027239 53043077 ~ 53121864 (+)
LOC118966073 NA coding downstream 44348 54231749 ~ 54233447 (+)
LOC110532392 dffb coding downstream 47395 54234796 ~ 54239506 (+)
LOC110532396 LOC106571991 coding downstream 57922 54245323 ~ 54249584 (+)
LOC110532395 LOC106571990 coding downstream 107621 54295022 ~ 54306173 (+)
twist3 LOC106572367 coding downstream 739327 54926728 ~ 54934570 (+)
G819327 NA non-coding upstream 12109 54136774 ~ 54136994 (+)
G819308 NA non-coding upstream 25177 54123676 ~ 54123926 (+)
G819295 NA non-coding upstream 33556 54114971 ~ 54115547 (+)
G819292 NA non-coding upstream 36353 54112545 ~ 54112750 (+)
G819287 NA non-coding upstream 41419 54107376 ~ 54107684 (+)
G819387 NA non-coding downstream 20910 54208311 ~ 54208514 (+)
G819401 NA non-coding downstream 37664 54225065 ~ 54225399 (+)
G819402 NA non-coding downstream 39538 54226939 ~ 54227245 (+)
G819403 NA non-coding downstream 40170 54227571 ~ 54228009 (+)
G819407 NA non-coding downstream 43883 54231284 ~ 54231518 (+)
LOC110532368 LOC106572016 other upstream 1421583 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 1823463 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 2802609 51345372 ~ 51346494 (+)
G815610 NA other upstream 3070161 51078447 ~ 51078942 (+)
G815428 NA other upstream 3348722 50796214 ~ 50800381 (+)
G819897 NA other downstream 539470 54726871 ~ 54727376 (+)
G820665 NA other downstream 1045857 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 1343636 55531033 ~ 55647541 (+)
G820944 NA other downstream 1510239 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 1786641 55974042 ~ 55975316 (+)

Expression


Co-expression Network