G819402


Basic Information

Item Value
gene id G819402
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 54226939 ~ 54227245 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU931833
gttttgtctaggggtttgttgtaggttatgggatagtggttagtggggttgtctagaatagtctatggctgcctggagtggttctcaatcagaggcaggtgtttattgttgtctctgattgggaaccatatttaggcagccatattctttgagtgtttcgtgggtgattgttcctgtcttagtgtttgtttgcaccagataaggctgtttaggttttcacgttaggtttcttgttttgtattgtttgtgtttatcttttattaaagatgaatcaaaataaccacgctgcattttggtcctcctctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU931833 True 307 lncRNA 0.40 1 54226939 54227245

Neighbor

gene id symbol gene type direction distance location
LOC110532391 LOC106571996 coding upstream 553441 53596083 ~ 53676213 (+)
LOC110532390 gbrd coding upstream 801246 53404905 ~ 53425693 (+)
LOC110532385 LOC106572000 coding upstream 1012177 53202981 ~ 53214762 (+)
LOC110532383 LOC106572002 coding upstream 1072811 53128438 ~ 53154128 (+)
LOC110532379 LOC106572005 coding upstream 1105075 53043077 ~ 53121864 (+)
LOC118966073 NA coding downstream 4504 54231749 ~ 54233447 (+)
LOC110532392 dffb coding downstream 7551 54234796 ~ 54239506 (+)
LOC110532396 LOC106571991 coding downstream 18078 54245323 ~ 54249584 (+)
LOC110532395 LOC106571990 coding downstream 67777 54295022 ~ 54306173 (+)
twist3 LOC106572367 coding downstream 699483 54926728 ~ 54934570 (+)
G819401 NA non-coding upstream 1540 54225065 ~ 54225399 (+)
G819387 NA non-coding upstream 18425 54208311 ~ 54208514 (+)
G819338 NA non-coding upstream 39538 54149103 ~ 54187401 (+)
G819327 NA non-coding upstream 89945 54136774 ~ 54136994 (+)
G819308 NA non-coding upstream 103013 54123676 ~ 54123926 (+)
G819403 NA non-coding downstream 326 54227571 ~ 54228009 (+)
G819407 NA non-coding downstream 4039 54231284 ~ 54231518 (+)
G819373 LOC106571994 non-coding downstream 14617 54241862 ~ 54243615 (+)
G819412 NA non-coding downstream 23459 54250704 ~ 54254479 (+)
LOC110532368 LOC106572016 other upstream 1499419 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 1901299 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 2880445 51345372 ~ 51346494 (+)
G815610 NA other upstream 3147997 51078447 ~ 51078942 (+)
G815428 NA other upstream 3426558 50796214 ~ 50800381 (+)
G819897 NA other downstream 499626 54726871 ~ 54727376 (+)
G820665 NA other downstream 1006013 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 1303792 55531033 ~ 55647541 (+)
G820944 NA other downstream 1470395 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 1746797 55974042 ~ 55975316 (+)

Expression


Co-expression Network