G819417


Basic Information

Item Value
gene id G819417
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 54257112 ~ 54257452 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU931855
gatgttagcatgttccagagatttctgtaagtctttagttgtcactctaggattcttcttgaCCTCATTGAGCatactgcactgtgctcttgcagtcatctttgcaggacggaattcctagggagagtagcaacagtgctgaactttctccatttatagacaatttggcTTACCCTGGACTgctgaacatcaaggcttttagagatacttttgtaaccctttccagctttatgcaagtcaacaattcttaatcttaggtcttctgagttctcttttgttcgaggcatggcaTGGTTCACAATAGCCAATTCAAAttttgagtgttttttatagggcaaggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU931855 True 341 lncRNA 0.41 1 54257112 54257452

Neighbor

gene id symbol gene type direction distance location
LOC110532396 LOC106571991 coding upstream 9197 54245323 ~ 54249584 (+)
LOC110532392 dffb coding upstream 17606 54234796 ~ 54239506 (+)
LOC118966073 NA coding upstream 23665 54231749 ~ 54233447 (+)
LOC110532391 LOC106571996 coding upstream 583614 53596083 ~ 53676213 (+)
LOC110532390 gbrd coding upstream 831419 53404905 ~ 53425693 (+)
LOC110532395 LOC106571990 coding downstream 37570 54295022 ~ 54306173 (+)
twist3 LOC106572367 coding downstream 669276 54926728 ~ 54934570 (+)
LOC110532404 LOC106572363 coding downstream 934901 55192353 ~ 55207365 (+)
LOC110532406 LOC106572360 coding downstream 960154 55217606 ~ 55224372 (+)
LOC110532408 ctbl1 coding downstream 1070660 55328112 ~ 55372587 (+)
G819416 NA non-coding upstream 113 54255764 ~ 54256999 (+)
G819412 NA non-coding upstream 2633 54250704 ~ 54254479 (+)
G819373 LOC106571994 non-coding upstream 13497 54241862 ~ 54243615 (+)
G819407 NA non-coding upstream 25594 54231284 ~ 54231518 (+)
G819418 NA non-coding downstream 65 54257517 ~ 54257963 (+)
G819421 NA non-coding downstream 5926 54263378 ~ 54263601 (+)
G819422 NA non-coding downstream 6709 54264161 ~ 54264423 (+)
G819424 NA non-coding downstream 10749 54268201 ~ 54268422 (+)
G819428 NA non-coding downstream 15876 54273328 ~ 54273828 (+)
LOC110532368 LOC106572016 other upstream 1529592 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 1931472 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 2910618 51345372 ~ 51346494 (+)
G815610 NA other upstream 3178170 51078447 ~ 51078942 (+)
G815428 NA other upstream 3456731 50796214 ~ 50800381 (+)
G819897 NA other downstream 469419 54726871 ~ 54727376 (+)
G820665 NA other downstream 975806 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 1273585 55531033 ~ 55647541 (+)
G820944 NA other downstream 1440188 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 1716590 55974042 ~ 55975316 (+)

Expression


Co-expression Network