G819424


Basic Information

Item Value
gene id G819424
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 54268201 ~ 54268422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU931862
ctgatgtcctttgacggctatttggtcttggccatagtggagtttggagtgtgactgtgaggttgtggacaggtgtcttttatactgataacaagttcaaacaggtgccattaatacaggtaacgagtggaggacagaggagcctcttaaagaagaagttacaggtctgtgagagccagaaatcttgcttgtttgtaggtgaccaaatacttatttttcacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU931862 True 222 lncRNA 0.43 1 54268201 54268422

Neighbor

gene id symbol gene type direction distance location
LOC110532396 LOC106571991 coding upstream 20286 54245323 ~ 54249584 (+)
LOC110532392 dffb coding upstream 28695 54234796 ~ 54239506 (+)
LOC118966073 NA coding upstream 34754 54231749 ~ 54233447 (+)
LOC110532391 LOC106571996 coding upstream 594703 53596083 ~ 53676213 (+)
LOC110532390 gbrd coding upstream 842508 53404905 ~ 53425693 (+)
LOC110532395 LOC106571990 coding downstream 26600 54295022 ~ 54306173 (+)
twist3 LOC106572367 coding downstream 658306 54926728 ~ 54934570 (+)
LOC110532404 LOC106572363 coding downstream 923931 55192353 ~ 55207365 (+)
LOC110532406 LOC106572360 coding downstream 949184 55217606 ~ 55224372 (+)
LOC110532408 ctbl1 coding downstream 1059690 55328112 ~ 55372587 (+)
G819422 NA non-coding upstream 3778 54264161 ~ 54264423 (+)
G819421 NA non-coding upstream 4600 54263378 ~ 54263601 (+)
G819418 NA non-coding upstream 10238 54257517 ~ 54257963 (+)
G819417 NA non-coding upstream 10749 54257112 ~ 54257452 (+)
G819416 NA non-coding upstream 11202 54255764 ~ 54256999 (+)
G819428 NA non-coding downstream 4906 54273328 ~ 54273828 (+)
G819431 NA non-coding downstream 8410 54276832 ~ 54277032 (+)
G819488 NA non-coding downstream 103121 54371543 ~ 54371845 (+)
G819661 NA non-coding downstream 116000 54384422 ~ 54384646 (+)
G819672 NA non-coding downstream 125946 54394368 ~ 54394571 (+)
LOC110532368 LOC106572016 other upstream 1540681 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 1942561 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 2921707 51345372 ~ 51346494 (+)
G815610 NA other upstream 3189259 51078447 ~ 51078942 (+)
G815428 NA other upstream 3467820 50796214 ~ 50800381 (+)
G819897 NA other downstream 458449 54726871 ~ 54727376 (+)
G820665 NA other downstream 964836 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 1262615 55531033 ~ 55647541 (+)
G820944 NA other downstream 1429218 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 1705620 55974042 ~ 55975316 (+)

Expression


Co-expression Network