G819696


Basic Information

Item Value
gene id G819696
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 54414692 ~ 54415076 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU932139
agctattccaagtttatcattttaaaaggctaattgaacattagaaaacccttttgcaattatgttagcacagctgaaaaccagaatagaaagaggagtgggaggccccggtgcacaactgagcaagaggacaagtacattagagtgtccagtttgagaaacagacgcctcacaagtcctcaactggcagcttcataaatagtacccgcaacaccagtctcaacgtcaacagtgaagaggcaactccgggatgctggccttctaggcagagttcctctgtccagtgtcggtgttcttttgcccatctcaatcttttatttttattggccagtctgagatgtggcttttttttgcaactctgcctcGAAGGCCAGCATCACAGAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU932139 True 385 lncRNA 0.45 1 54414692 54415076

Neighbor

gene id symbol gene type direction distance location
LOC110532395 LOC106571990 coding upstream 108519 54295022 ~ 54306173 (+)
LOC110532396 LOC106571991 coding upstream 166777 54245323 ~ 54249584 (+)
LOC110532392 dffb coding upstream 175186 54234796 ~ 54239506 (+)
LOC118966073 NA coding upstream 181245 54231749 ~ 54233447 (+)
LOC110532391 LOC106571996 coding upstream 741194 53596083 ~ 53676213 (+)
twist3 LOC106572367 coding downstream 511652 54926728 ~ 54934570 (+)
LOC110532404 LOC106572363 coding downstream 777277 55192353 ~ 55207365 (+)
LOC110532406 LOC106572360 coding downstream 802530 55217606 ~ 55224372 (+)
LOC110532408 ctbl1 coding downstream 913036 55328112 ~ 55372587 (+)
LOC110532409 LOC106572359 coding downstream 960099 55375175 ~ 55410299 (+)
G819695 NA non-coding upstream 70 54414381 ~ 54414622 (+)
G819693 NA non-coding upstream 1640 54412829 ~ 54413052 (+)
G819672 NA non-coding upstream 20121 54394368 ~ 54394571 (+)
G819661 NA non-coding upstream 30046 54384422 ~ 54384646 (+)
G819488 NA non-coding upstream 42847 54371543 ~ 54371845 (+)
G819701 NA non-coding downstream 3962 54419038 ~ 54419660 (+)
G819702 NA non-coding downstream 4731 54419807 ~ 54420159 (+)
G819707 NA non-coding downstream 7880 54422956 ~ 54423242 (+)
G819712 NA non-coding downstream 13005 54428081 ~ 54428323 (+)
G819732 NA non-coding downstream 29916 54444992 ~ 54445212 (+)
LOC110532368 LOC106572016 other upstream 1687172 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 2089052 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 3068198 51345372 ~ 51346494 (+)
G815610 NA other upstream 3335750 51078447 ~ 51078942 (+)
G815428 NA other upstream 3614311 50796214 ~ 50800381 (+)
G819897 NA other downstream 311795 54726871 ~ 54727376 (+)
G820665 NA other downstream 818182 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 1115961 55531033 ~ 55647541 (+)
G820944 NA other downstream 1282564 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 1558966 55974042 ~ 55975316 (+)

Expression


Co-expression Network