G819712


Basic Information

Item Value
gene id G819712
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 54428081 ~ 54428323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU932155
GAATAAAtatgcactaccgttcaaaagtttgaggtcacttagacatttccttgtttttgaaagaaaagcacattttttgtccattaaaataatgtcaaattgatcagaaatagagtgcagacattgttaatgttgtaaatgactattgtagctggaaacggcagattatttttatggaatatctacatagtcgtgcagagacccattatcagcaaccatcactcctgtgttccaatggcaagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU932155 True 243 lncRNA 0.35 1 54428081 54428323

Neighbor

gene id symbol gene type direction distance location
LOC110532395 LOC106571990 coding upstream 121908 54295022 ~ 54306173 (+)
LOC110532396 LOC106571991 coding upstream 180166 54245323 ~ 54249584 (+)
LOC110532392 dffb coding upstream 188575 54234796 ~ 54239506 (+)
LOC118966073 NA coding upstream 194634 54231749 ~ 54233447 (+)
LOC110532391 LOC106571996 coding upstream 754583 53596083 ~ 53676213 (+)
twist3 LOC106572367 coding downstream 498405 54926728 ~ 54934570 (+)
LOC110532404 LOC106572363 coding downstream 764030 55192353 ~ 55207365 (+)
LOC110532406 LOC106572360 coding downstream 789283 55217606 ~ 55224372 (+)
LOC110532408 ctbl1 coding downstream 899789 55328112 ~ 55372587 (+)
LOC110532409 LOC106572359 coding downstream 946852 55375175 ~ 55410299 (+)
G819707 NA non-coding upstream 4839 54422956 ~ 54423242 (+)
G819702 NA non-coding upstream 7922 54419807 ~ 54420159 (+)
G819701 NA non-coding upstream 8421 54419038 ~ 54419660 (+)
G819696 NA non-coding upstream 13005 54414692 ~ 54415076 (+)
G819695 NA non-coding upstream 13459 54414381 ~ 54414622 (+)
G819732 NA non-coding downstream 16669 54444992 ~ 54445212 (+)
G819734 NA non-coding downstream 18441 54446764 ~ 54447000 (+)
G819740 NA non-coding downstream 26529 54454852 ~ 54458188 (+)
G819763 NA non-coding downstream 65580 54493903 ~ 54542001 (+)
G819787 NA non-coding downstream 89755 54518078 ~ 54522813 (+)
LOC110532368 LOC106572016 other upstream 1700561 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 2102441 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 3081587 51345372 ~ 51346494 (+)
G815610 NA other upstream 3349139 51078447 ~ 51078942 (+)
G815428 NA other upstream 3627700 50796214 ~ 50800381 (+)
G819897 NA other downstream 298548 54726871 ~ 54727376 (+)
G820665 NA other downstream 804935 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 1102714 55531033 ~ 55647541 (+)
G820944 NA other downstream 1269317 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 1545719 55974042 ~ 55975316 (+)

Expression


Co-expression Network